Evidence map›Paper›PMID 25860339›Full record

ArticlePloS one2015

The GTPase-activating protein Rga1 interacts with Rho3 GTPase and may regulate its function in polarized growth in budding yeast.

Fei He, Wen-Chao Nie, Zongtian Tong, Si-Min Yuan, Ting Gong, Yuan Liao, Erfei Bi, Xiang-Dong Gao

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
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  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Fei HeDepartment of Microbiology, College of Life Sciences, Wuhan University, Wuhan, China.
Wen-Chao NieDepartment of Microbiology, College of Life Sciences, Wuhan University, Wuhan, China.
Zongtian TongDepartment of Cell and Developmental Biology, University of Pennsylvania Perelman School of Medicine, Philadelphia, Pennsylvania, United States of America.
Si-Min YuanDepartment of Microbiology, College of Life Sciences, Wuhan University, Wuhan, China.
Ting GongDepartment of Microbiology, College of Life Sciences, Wuhan University, Wuhan, China.
Yuan LiaoDepartment of Microbiology, College of Life Sciences, Wuhan University, Wuhan, China.
Erfei BiDepartment of Cell and Developmental Biology, University of Pennsylvania Perelman School of Medicine, Philadelphia, Pennsylvania, United States of America.
Xiang-Dong GaoDepartment of Microbiology, College of Life Sciences, Wuhan University, Wuhan, China; Hubei Provincial Cooperative Innovation Center of Industrial Fermentation, Wuhan, China.
Wuhan University · CNUniversity of Pennsylvania · USCenter of Hubei Cooperative Innovation for Emissions Trading System · CN

Funding

SIGNALING MECHANISMS IN CELL POLARITY IN YEASTR01GM059216 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI BI, ERFEI · 1999 to 2012
$3.8M
NIGMS NIH HHS R01 GM059216
6 · The paper itself

Abstract

In budding yeast, Rga1 negatively regulates the Rho GTPase Cdc42 by acting as a GTPase-activating protein (GAP) for Cdc42. To gain insight into the function and regulation of Rga1, we overexpressed Rga1 and an N-terminally truncated Rga1-C538 (a.a. 538-1007) segment. Overexpression of Rga1-C538 but not full-length Rga1 severely impaired growth and cell morphology in wild-type cells. We show that Rga1 is phosphorylated during the cell cycle. The lack of phenotype for full-length Rga1 upon overexpression may result from a negative regulation by G1-specific Pho85, a cyclin-dependent kinase (CDK). From a high-copy suppressor screen, we isolated RHO3, SEC9, SEC1, SSO1, SSO2, and SRO7, genes involved in exocytosis, as suppressors of the growth defect caused by Rga1-C538 overexpression. Moreover, we detected that Rga1 interacts with Rho3 in two-hybrid and bimolecular fluorescence complementation (BiFC) assays. Rga1 preferentially interacts with the GTP-bound form of Rho3 and the interaction requires the GAP domain and additional sequence upstream of the GAP domain. Our data suggest that the interaction of Rga1 with Rho3 may regulate Rho3's function in polarized bud growth.

Indexed as

ExocytosisGene ExpressionGTPase-Activating ProteinsPhenotypePhosphorylationProtein BindingProtein Interaction Domains and Motifsrho GTP-Binding ProteinsSaccharomycetalesGTPase-Activating Proteinsrho GTP-Binding Proteins

Identifiers

PMID25860339
PMCPMC4393305
OpenAlexW2009622245

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.