Evidence map›Paper›PMID 25859655›Full record

ArticlePloS one2015

Two-dimensional zymography differentiates gelatinase isoforms in stimulated microglial cells and in brain tissues of acute brain injuries.

Shanyan Chen, Fanjun Meng, Zhenzhou Chen, Brittany N Tomlinson, Jennifer M Wesley, Grace Y Sun, Adam T Whaley-Connell, James R Sowers, Jiankun Cui, Zezong Gu

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 12 citations in OpenAlex.

  1. MMP-2 and MMP-9 levels in plasma are altered and associated with mortality in COVID-19 patients.Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie · 2021
    Article
  2. Review
  3. Article
  4. Gelatinase activity imaged by activatable cell-penetrating peptides in cell-based and in vivo models of stroke.Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Shanyan ChenDepartment of Pathology and Anatomical Sciences, University of Missouri School of Medicine, Columbia, Missouri, United States of America; Center for Translational Neuroscience, University of Missouri School of Medicine, Columbia, Missouri, United States of America; Interdisciplinary Neuroscience Program, University of Missouri, Columbia, Missouri, United States of America.
Fanjun MengDepartment of Pathology and Anatomical Sciences, University of Missouri School of Medicine, Columbia, Missouri, United States of America; Center for Translational Neuroscience, University of Missouri School of Medicine, Columbia, Missouri, United States of America.
Zhenzhou ChenDepartment of Pathology and Anatomical Sciences, University of Missouri School of Medicine, Columbia, Missouri, United States of America; Center for Translational Neuroscience, University of Missouri School of Medicine, Columbia, Missouri, United States of America.
Brittany N TomlinsonDepartment of Pathology and Anatomical Sciences, University of Missouri School of Medicine, Columbia, Missouri, United States of America; Center for Translational Neuroscience, University of Missouri School of Medicine, Columbia, Missouri, United States of America; MS in Pathology program, University of Missouri Graduate School, Columbia, Missouri, United States of America.
Jennifer M WesleyDepartment of Pathology and Anatomical Sciences, University of Missouri School of Medicine, Columbia, Missouri, United States of America; Center for Translational Neuroscience, University of Missouri School of Medicine, Columbia, Missouri, United States of America.
Grace Y SunDepartment of Pathology and Anatomical Sciences, University of Missouri School of Medicine, Columbia, Missouri, United States of America; Center for Translational Neuroscience, University of Missouri School of Medicine, Columbia, Missouri, United States of America; Department of Biochemistry, University of Missouri School of Medicine, Columbia, Missouri, United States of America.
Adam T Whaley-ConnellDepartment of Internal Medicine Diabetes and Cardiovascular Center, University of Missouri School of Medicine, Columbia, Missouri, United States of America; Harry S. Truman Memorial Veterans' Hospital, Columbia, Missouri, United States of America.
James R SowersDepartment of Internal Medicine Diabetes and Cardiovascular Center, University of Missouri School of Medicine, Columbia, Missouri, United States of America; Harry S. Truman Memorial Veterans' Hospital, Columbia, Missouri, United States of America.
Jiankun CuiDepartment of Pathology and Anatomical Sciences, University of Missouri School of Medicine, Columbia, Missouri, United States of America; Center for Translational Neuroscience, University of Missouri School of Medicine, Columbia, Missouri, United States of America; Harry S. Truman Memorial Veterans' Hospital, Columbia, Missouri, United States of America.
Zezong GuDepartment of Pathology and Anatomical Sciences, University of Missouri School of Medicine, Columbia, Missouri, United States of America; Center for Translational Neuroscience, University of Missouri School of Medicine, Columbia, Missouri, United States of America; Harry S. Truman Memorial Veterans' Hospital, Columbia, Missouri, United States of America.
University of Missouri · USHarry S. Truman Memorial Veterans' Hospital · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Excessive activation of gelatinases (MMP-2/-9) is a key cause of detrimental outcomes in neurodegenerative diseases. A single-dimension zymography has been widely used to determine gelatinase expression and activity, but this method is inadequate in resolving complex enzyme isoforms, because gelatinase expression and activity could be modified at transcriptional and posttranslational levels. In this study, we investigated gelatinase isoforms under in vitro and in vivo conditions using two-dimensional (2D) gelatin zymography electrophoresis, a protocol allowing separation of proteins based on isoelectric points (pI) and molecular weights. We observed organomercuric chemical 4-aminophenylmercuric acetate-induced activation of MMP-2 isoforms with variant pI values in the conditioned medium of human fibrosarcoma HT1080 cells. Studies with murine BV-2 microglial cells indicated a series of proform MMP-9 spots separated by variant pI values due to stimulation with lipopolysaccharide (LPS). The MMP-9 pI values were shifted after treatment with alkaline phosphatase, suggesting presence of phosphorylated isoforms due to the proinflammatory stimulation. Similar MMP-9 isoforms with variant pI values in the same molecular weight were also found in mouse brains after ischemic and traumatic brain injuries. In contrast, there was no detectable pI differentiation of MMP-9 in the brains of chronic Zucker obese rats. These results demonstrated effective use of 2D zymography to separate modified MMP isoforms with variant pI values and to detect posttranslational modifications under different pathological conditions.

Indexed as

AnimalsBrainBrain InjuriesBrain IschemiaCell LineCulture Media, ConditionedDisease Models, AnimalGelatinasesHumansIsoenzymesMaleMatrix Metalloproteinase 9MiceMicrogliaNeurogenic InflammationRatsCulture Media, ConditionedGelatinasesIsoenzymesMatrix Metalloproteinase 9

Identifiers

PMID25859655
PMCPMC4393235
OpenAlexW2015920307

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.