Evidence map›Paper›PMID 25858255›Full record

ArticleJournal of child psychology and psychiatry, and allied disciplines2015

The Philadelphia Neurodevelopmental Cohort: constructing a deep phenotyping collaborative.

Monica E Calkins, Kathleen R Merikangas, Tyler M Moore, Marcy Burstein, Meckenzie A Behr, Theodore D Satterthwaite, Kosha Ruparel, Daniel H Wolf, David R Roalf, Frank D Mentch and 7 more

Abstract read
In one paragraph

Article in Journal of child psychology and psychiatry, and allied disciplines, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 170 papers, 5 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
170citing papers in PubMed, 5 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

170 citing papers in PubMed, 5 syntheses or guidelines pooled it.

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  8. Big data and psychiatry: advances, constraints and future directions.World psychiatry : official journal of the World Psychiatric Association (WPA) · 2026
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  10. Sex Differences in Psychopathology and Neurocognition in Community Youth With Autism Spectrum Disorder.Autism research : official journal of the International Society for Autism Research · 2026
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110 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Monica E CalkinsUniversity of Pennsylvania, Department of Psychiatry, Neuropsychiatry Section, Perelman School of Medicine, PA, United States.
Kathleen R MerikangasNational Institute of Mental Health, Genetic Epidemiology Research Branch, Intramural Research Program, Bethesda, MD, United States.
Tyler M MooreUniversity of Pennsylvania, Department of Psychiatry, Neuropsychiatry Section, Perelman School of Medicine, PA, United States.
Marcy BursteinNational Institute of Mental Health, Genetic Epidemiology Research Branch, Intramural Research Program, Bethesda, MD, United States.
Meckenzie A BehrCenter for Applied Genomics at The Children's Hospital of Philadelphia, PA, United States.
Theodore D SatterthwaiteUniversity of Pennsylvania, Department of Psychiatry, Neuropsychiatry Section, Perelman School of Medicine, PA, United States.
Kosha RuparelUniversity of Pennsylvania, Department of Psychiatry, Neuropsychiatry Section, Perelman School of Medicine, PA, United States.
Daniel H WolfUniversity of Pennsylvania, Department of Psychiatry, Neuropsychiatry Section, Perelman School of Medicine, PA, United States.
David R RoalfUniversity of Pennsylvania, Department of Psychiatry, Neuropsychiatry Section, Perelman School of Medicine, PA, United States.
Frank D MentchCenter for Applied Genomics at The Children's Hospital of Philadelphia, PA, United States.
Haijun QiuCenter for Applied Genomics at The Children's Hospital of Philadelphia, PA, United States.
Rosetta ChiavacciCenter for Applied Genomics at The Children's Hospital of Philadelphia, PA, United States.
John J ConnollyCenter for Applied Genomics at The Children's Hospital of Philadelphia, PA, United States.
Patrick M A SleimanDepartment of Pediatrics,The Perelman School of Medicine, University of Pennsylvania, PA, United States.
Ruben C GurUniversity of Pennsylvania, Department of Psychiatry, Neuropsychiatry Section, Perelman School of Medicine, PA, United States.
Hakon Hakonarson *Center for Applied Genomics at The Children's Hospital of Philadelphia, PA, United States.
Raquel E Gur *University of Pennsylvania, Department of Psychiatry, Neuropsychiatry Section, Perelman School of Medicine, PA, United States.

Funding

Neurodevelopmental Genomics: Trajectories of Complex PhenotypesRC2MH089983 · NIMH · UNIVERSITY OF PENNSYLVANIA · PI GUR, RAQUEL E · 2009 to 2011
$14.3M
2/2 Neurodevelopmental Genomics: Trajectories of Complex PhenotypesRC2MH089924 · NIMH · CHILDREN'S HOSP OF PHILADELPHIA · PI HAKONARSON, HAKON · 2009 to 2011
$10.7M
The Intellectual and Developmental Disabilities Research Center at CHOP/PennU54HD086984 · NICHD · CHILDREN'S HOSP OF PHILADELPHIA · PI SCHULTZ, ROBERT THOMAS · 2016 to 2020
$6.3M
Neurodevelopmental Genomics SupplementZIAMH002931 · NIMH · NATIONAL INSTITUTE OF MENTAL HEALTH · PI MERIKANGAS, KATHLEEN R · 2011 to 2015
$1.2M
A Prospective Study of Endophenotypes in At-Risk Youths and Their SiblingsK08MH079364 · NIMH · UNIVERSITY OF PENNSYLVANIA · PI CALKINS, MONICA E · 2007 to 2011
$750k
Neuroimaging of Dimensional Reward Dysfunction in AdolescenceK23MH098130 · NIMH · UNIVERSITY OF PENNSYLVANIA · PI SATTERTHWAITE, THEODORE · 2012 to 2015
$723k
NICHD NIH HHS U54 HD086984NIMH NIH HHS K08 MH079364NIMH NIH HHS K08MH079364NIMH NIH HHS K23 MH098130NIMH NIH HHS K23MH098130NIMH NIH HHS MH089924NIMH NIH HHS MH089983NIMH NIH HHS RC2 MH089924NIMH NIH HHS RC2 MH089983
6 · The paper itself

Abstract

backgroundAn integrative multidisciplinary approach is required to elucidate the multiple factors that shape neurodevelopmental trajectories of mental disorders. The Philadelphia Neurodevelopmental Cohort (PNC), funded by the National Institute of Mental Health Grand Opportunity (GO) mechanism of the American Recovery and Reinvestment Act, was designed to characterize clinical and neurobehavioral phenotypes of genotyped youths. Data generated, which are recently available through the NIMH Database of Genotypes and Phenotypes (dbGaP), have garnered considerable interest. We provide an overview of PNC recruitment and clinical assessment methods to allow informed use and interpretation of the PNC resource by the scientific community. We also evaluate the structure of the assessment tools and their criterion validity.

methodsParticipants were recruited from a large pool of youths (n = 13,958) previously identified and genotyped at The Children's Hospital of Philadelphia. A comprehensive computerized tool for structured evaluation of psychopathology domains (GOASSESS) was constructed. We administered GOASSESS to all participants and used factor analysis to evaluate its structure.

resultsA total of 9,498 youths (aged 8-21; mean age = 14.2; European American = 55.8%; African American = 32.9%; Other = 11.4%) were enrolled. Factor analysis revealed a strong general psychopathology factor, and specific 'anxious-misery', 'fear', and 'behavior' factors. The 'behavior' factor had a small negative correlation (-0.21) with overall accuracy of neurocognitive performance, particularly in tests of executive and complex reasoning. Being female had a high association with the 'anxious-misery' and low association with the 'behavior' factors. The psychosis spectrum was also best characterized by a general factor and three specific factors: ideas about 'special abilities/persecution,' 'unusual thoughts/perceptions', and 'negative/disorganized' symptoms.

conclusionsThe PNC assessment mechanism yielded psychopathology data with strong factorial validity in a large diverse community cohort of genotyped youths. Factor scores should be useful for dimensional integration with other modalities (neuroimaging, genomics). Thus, PNC public domain resources can advance understanding of complex inter-relationships among genes, cognition, brain, and behavior involved in neurodevelopment of common mental disorders.

Indexed as

Databases, FactualGenotypePhenotypeAdolescentAdultChildCohort StudiesCooperative BehaviorDatabases, GeneticFemaleHumansMaleNeurodevelopmental DisordersPhiladelphiaYoung AdultadolescentsanxietybehaviorchildrenCommunity cohortcomorbiditygenomicsmoodneurocognitionneuroimagingpsychopathologypsychosispublic domainstructureyoung adults

Identifiers

PMID25858255
PMCPMC4598260

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.