Evidence map›Paper›PMID 25858089›Full record

ArticleMolecular oral microbiology2015

The roles of RgpB and Kgp in late onset gingipain activity in the vimA-defective mutant of Porphyromonas gingivalis W83.

Y Dou, A Robles, F Roy, A W Aruni, L Sandberg, E Nothnagel, H M Fletcher

Abstract read
In one paragraph

Article in Molecular oral microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.0field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 12 citations in OpenAlex.

  1. Discovery of Gingipains andFoods (Basel, Switzerland) · 2025
    Review
  2. Efficacy of gigantol, a bibenzyl compound, againstJournal of oral microbiology · 2025
    Article
  3. Article
  4. Article
  5. Article
  6. Pathogenesis of Important Virulence Factors ofFrontiers in cellular and infection microbiology · 2019
    Review
  7. Article
  8. Post-translational regulation of aJournal of oral microbiology · 2018
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Y DouDivision of Microbiology and Molecular Genetics, School of Medicine, Loma Linda University, Loma Linda, CA, USA.
A RoblesDivision of Microbiology and Molecular Genetics, School of Medicine, Loma Linda University, Loma Linda, CA, USA.
F RoyDivision of Microbiology and Molecular Genetics, School of Medicine, Loma Linda University, Loma Linda, CA, USA.
A W AruniDivision of Microbiology and Molecular Genetics, School of Medicine, Loma Linda University, Loma Linda, CA, USA.
L SandbergDivision of Microbiology and Molecular Genetics, School of Medicine, Loma Linda University, Loma Linda, CA, USA.
E NothnagelBotany and Plant Sciences, University of California, Riverside, CA, USA.
H M FletcherDivision of Microbiology and Molecular Genetics, School of Medicine, Loma Linda University, Loma Linda, CA, USA.
Loma Linda University · USUniversity of California, Riverside · US

Funding

Studies on virulence regulation in PorphyromonasR01DE013664 · NIDCR · LOMA LINDA UNIVERSITY · PI FLETCHER, HANSEL M. · 2002 to 2011
$3.3M
Mechanisms for adaptation to oxidative stress in Porphyromonas gingivalisR01DE019730 · NIDCR · LOMA LINDA UNIVERSITY · PI FLETCHER, HANSEL M. · 2009 to 2013
$2.0M
ECF sigma factors in adaptation and virulence of Porphyromonas gingivalisR01DE022508 · NIDCR · LOMA LINDA UNIVERSITY · PI FLETCHER, HANSEL M. · 2012 to 2016
$1.8M
Studies on the virulence of Fillifactor alocisR21DE022724 · NIDCR · LOMA LINDA UNIVERSITY · PI FLETCHER, HANSEL M. · 2012 to 2013
$427k
Studies on the virulence regulation in PorphyromonasR56DE013664 · NIDCR · LOMA LINDA UNIVERSITY · PI FLETCHER, HANSEL M. · 2014 to 2014
$291k
NIDCR NIH HHS DE019730NIDCR NIH HHS DE022508NIDCR NIH HHS DE022724NIDCR NIH HHS R01 DE013664NIDCR NIH HHS R01 DE019730NIDCR NIH HHS R01 DE022508NIDCR NIH HHS R21 DE022724NIDCR NIH HHS R56 DE013664NIDCR NIH HHS R56-DE13664
6 · The paper itself

Abstract

Previous studies have shown that VimA, an acetyltransferase, can modulate gingipain biogenesis in Porphyromonas gingivalis. Inactivation of the vimA gene resulted in isogenic mutants that showed a late onset of gingipain activity that only occurred during the stationary growth phase. To further elucidate the role and contribution of the gingipains in this VimA-dependent process, isogenic mutants defective in the gingipain genes in the vimA-deficient genetic background were evaluated. In contrast with the wild-type strain, RgpB and Kgp gingipain activities were absent in exponential phase in the ∆rgpA::tetQ-vimA::ermF mutant. However, these activities increased to 31 and 53%, respectively, of that of the wild-type during stationary phase. In the ∆rgpA::cat-∆kgp::tetQ-vimA::ermF mutant, the RgpB protein was observed in the extracellular fraction but no activity was present even at the stationary growth phase. There was no gingipain activity observed in the ∆rgpB::cat-∆kgp::tetQ-vimA::ermF mutant whereas Kgp activity in ∆rgpA::cat-∆rgpB::tetQ-vimA::ermF mutant was 24% of the wild-type at late stationary phase. In contrast to RgpA, the glycosylation profile of the RgpB catalytic domain from both W83 and P. gingivalis FLL92 (vimA::ermF) showed similarity. Taken together, the results suggest multiple gingipain activation pathways in P. gingivalis. Whereas the maturation pathways for RgpA and RgpB are different, the late-onset gingipain activity in the vimA-defective mutant was due to activation/maturation of RgpB and Kgp. Moreover, unlike RgpA, which is VimA-dependent, the maturation/activation pathways for RgpB and Kgp are interdependent in the absence VimA.

Indexed as

Genes, BacterialAcetyltransferasesAdhesins, BacterialAnimalsCatsCysteine EndopeptidasesGingipain Cysteine EndopeptidasesGlycosylationHemagglutininsMutationPorphyromonas gingivalisAcetyltransferasesAdhesins, BacterialCysteine EndopeptidasesGingipain Cysteine EndopeptidasesHemagglutininsacetylationgingipainglycosylationperiodontal diseaseVimA

Identifiers

PMID25858089
PMCPMC4564340
OpenAlexW2098794583

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.