Evidence map›Paper›PMID 25857734›Full record

ArticlePathogens and disease2015

The genome sequence of four isolates from the family Lichtheimiaceae.

Marcus C Chibucos, Kizee A Etienne, Joshua Orvis, Hongkyu Lee, Sean Daugherty, Shawn R Lockhart, Ashraf S Ibrahim, Vincent M Bruno

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Pathogens and disease, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Marcus C ChibucosInstitute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD 21201, USA Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, MD 21201, USA.
Kizee A EtienneCenters for Disease Control and Prevention, Atlanta, GA 30333, USA.
Joshua OrvisInstitute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD 21201, USA.
Hongkyu LeeThe Division of Infectious Diseases, Los Angeles Biomedical Research Institute at Harbor-University of California Los Angeles (UCLA) Medical Center, Torrance, CA 90502, USA.
Sean DaughertyInstitute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD 21201, USA.
Shawn R LockhartCenters for Disease Control and Prevention, Atlanta, GA 30333, USA.
Ashraf S IbrahimThe Division of Infectious Diseases, Los Angeles Biomedical Research Institute at Harbor-University of California Los Angeles (UCLA) Medical Center, Torrance, CA 90502, USA David Geffen School of Medicine at UCLA, Los Angeles, CA 90095, USA.
Vincent M BrunoInstitute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD 21201, USA Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, MD 21201, USA vbruno@umaryland.edu.

Funding

Technology CoreU19AI110820 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI BRUNO, VINCENT MICHAEL · 2014 to 2023
$36.5M
Novel Toxins and Receptors in Mucormycosis Pathogenesis and TreatmentR01AI063503 · NIAID · LUNDQUIST INSTITUTE FOR BIOMEDICAL INNOVATION AT HARBOR-UCLA MEDICAL CENTER · PI IBRAHIM, ASHRAF S. · 2006 to 2025
$7.3M
NIAID NIH HHS R01 AI063503NIAID NIH HHS U19 AI110820NIAID NIH HHS U19AI110820PHS HHS HHSN272200900009C
6 · The paper itself

Abstract

This study reports the release of draft genome sequences of two isolates of Lichtheimia corymbifera and two isolates of L. ramosa. Phylogenetic analyses indicate that the two L. corymbifera strains (CDC-B2541 and 008-049) are closely related to the previously sequenced L. corymbifera isolate (FSU 9682) while our two L. ramosa strains CDC-B5399 and CDC-B5792 cluster apart from them. These genome sequences will further the understanding of intraspecies and interspecies genetic variation within the Mucoraceae family of pathogenic fungi.

Indexed as

Genome, FungalSequence Analysis, DNACluster AnalysisEnvironmental MicrobiologyGenetic VariationHumansMolecular Sequence DataMucoralesMucormycosisPhylogenySequence Homologyfungal genomicsfungal phylogenyLichtheimiaMucoralesmucormycosisRhizopus

Identifiers

PMID25857734
PMCPMC4467520

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.