Evidence map›Paper›PMID 25857493›Full record

ArticleThe Indian journal of medical research2015

Comparative proteomic analysis of sequential isolates of Mycobacterium tuberculosis from a patient with pulmonary tuberculosis turning from drug sensitive to multidrug resistant.

Amit Singh, Krishnamoorthy Gopinath, Prashant Sharma, Deepa Bisht, Pawan Sharma, Niti Singh, Sarman Singh

Open access · diamondAbstract readCase ReportsComparative Study
In one paragraph

Article in The Indian journal of medical research, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 51 citations in OpenAlex.

  1. Article
  2. Editorial: Pathogenesis, diagnostics, treatments ofFrontiers in cellular and infection microbiology · 2024
    Article
  3. Review
  4. Article
  5. Review
  6. Review
  7. Evolution of Drug-ResistantFrontiers in microbiology · 2021
    Review
  8. Review
  9. Article
  10. Biochemical Characterization of Isoniazid-resistantMolecular & cellular proteomics : MCP · 2018
    Article
  11. Key Issues in the Management of Multi-Drug Resistant Tuberculosis: A Case Report.Open access Macedonian journal of medical sciences · 2018
    Article
  12. Review
  13. Cure of tuberculosis using nanotechnology: An overview.Journal of microbiology (Seoul, Korea) · 2018
    Review
  14. Article
  15. Frontiers in microbiology · 2017
    Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Tuberculosis Diagnosis and Management: Recent Advances.Journal of global infectious diseases
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Amit Singh
Krishnamoorthy Gopinath
Prashant Sharma
Deepa Bisht
Pawan Sharma
Niti Singh
Sarman SinghDivision of Clinical Microbiology & Molecular Medicine, Department of Laboratory Medicine, All India Institute of Medical Sciences, New Delhi, India.
All India Institute of Medical Sciences · INNational JALMA Institute for Leprosy & Other Mycobacterial Diseases · INInternational Centre for Genetic Engineering and Biotechnology · ITLRS Institute of Tuberculosis and Respiratory Diseases · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND &

objectivesTuberculosis is a major health problem in India, and the emergence of multidrug resistant (MDR) and extensively drug resistant (XDR) strains of Mycobacterium tuberculosis (Mtb) has further complicated the situation. Though several studies characterizing drug sensitive and drug resistant strains are available in literature, almost all studies are done on unrelated strains. Therefore, the objective of this study was to compare the proteomic data of four sequential isolates of Mtb from a single patient who developed MDR-TB during the course of anti-tuberculosis therapy (ATT).

methodsIn this study, using two-dimensional (2D) gel electrophoresis and MALDI-TOF mass spectrometry, we compared and analyzed the cell lysate proteins of Mtb sequential clinical isolates from a patient undergoing anti-TB treatment. The mRNA expression levels of selected identified proteins were determined by quantitative real-time polymerase chain reaction (qRT-PCR).

resultsThe genotypes of all four isolates remained homologous, indicating no re-infection. The initial isolate (before treatment) was sensitive to all first-line drugs, but the consecutive isolates were found to be resistant to isoniazid (INH) and rifampicin (RIF) and developed mutations in the katG, inhA and rpoB. the intensities of 27 protein spots were found to be consistently overexpressed in INH and RIF resistant isolates. The most prominent and overexpressed proteins found during the development of drug resistance were GarA (Rv1827), wag31 (Rv2145c), Rv1437 and Rv2970c. INTERPRETATION &

conclusionsThis preliminary proteomic study provides an insight about the proteins that are upregulated during drug resistance development. These upregulated proteins, identified here, could prove useful as immunodiagnostic and possibly drug resistant markers in future. However, more studies are required to confirm these findings.

Indexed as

ProteomicsAdultAntitubercular AgentsBacterial ProteinsDrug Resistance, Multiple, BacterialHumansMaleMycobacterium tuberculosisReal-Time Polymerase Chain ReactionSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationTuberculosis, PulmonaryYoung AdultAntitubercular AgentsBacterial Proteins

Identifiers

PMID25857493
PMCPMC4405938
OpenAlexW1530863381

What OpenQuestion holds

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LicenceCC BY-NC-SA
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.