Evidence map›Paper›PMID 25857264›Full record

ArticleCell death and differentiation2015

A novel autoregulatory loop between the Gcn2-Atf4 pathway and (L)-Proline [corrected] metabolism controls stem cell identity.

C D'Aniello, A Fico, L Casalino, O Guardiola, G Di Napoli, F Cermola, D De Cesare, R Tatè, G Cobellis, E J Patriarca and 1 more

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in Cell death and differentiation, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 68 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

C D'AnielloInstitute of Genetics and Biophysics 'A. Buzzati-Traverso', CNR, Naples, Italy.
A FicoInstitute of Genetics and Biophysics 'A. Buzzati-Traverso', CNR, Naples, Italy.
L CasalinoInstitute of Genetics and Biophysics 'A. Buzzati-Traverso', CNR, Naples, Italy.
O GuardiolaInstitute of Genetics and Biophysics 'A. Buzzati-Traverso', CNR, Naples, Italy.
G Di NapoliInstitute of Genetics and Biophysics 'A. Buzzati-Traverso', CNR, Naples, Italy.
F CermolaInstitute of Genetics and Biophysics 'A. Buzzati-Traverso', CNR, Naples, Italy.
D De CesareInstitute of Genetics and Biophysics 'A. Buzzati-Traverso', CNR, Naples, Italy.
R TatèIntegrated Microscopy, Institute of Genetics and Biophysics 'A. Buzzati-Traverso', CNR, Naples, Italy.
G CobellisDepartment of Biophysics, Biochemistry and General Pathology, Second University of Naples (SUN), Naples, Italy.
E J PatriarcaInstitute of Genetics and Biophysics 'A. Buzzati-Traverso', CNR, Naples, Italy.
G MinchiottiInstitute of Genetics and Biophysics 'A. Buzzati-Traverso', CNR, Naples, Italy.
Institute of Genetics and Biophysics · IT

Funding

Telethon TGM11Z03
6 · The paper itself

Abstract

Increasing evidence indicates that metabolism is implicated in the control of stem cell identity. Here, we demonstrate that embryonic stem cell (ESC) behaviour relies on a feedback loop that involves the non-essential amino acid L-Proline (L-Pro) in the modulation of the Gcn2-Eif2α-Atf4 amino acid starvation response (AAR) pathway that in turn regulates L-Pro biosynthesis. This regulatory loop generates a highly specific intrinsic shortage of L-Pro that restricts proliferation of tightly packed domed-like ESC colonies and safeguards ESC identity. Indeed, alleviation of this nutrient stress condition by exogenously provided L-Pro induces proliferation and modifies the ESC phenotypic and molecular identity towards that of mesenchymal-like, invasive pluripotent stem cells. Either pharmacological inhibition of the prolyl-tRNA synthetase by halofuginone or forced expression of Atf4 antagonises the effects of exogenous L-Pro. Our data provide unprecedented evidence that L-Pro metabolism and the nutrient stress response are functionally integrated to maintain ESC identity.

Indexed as

Activating Transcription Factor 4AnimalsEmbryonic Stem CellsFeedback, PhysiologicalMiceProlineProtein Serine-Threonine KinasesSignal TransductionStress, PhysiologicalActivating Transcription Factor 4Atf4 protein, mouseEif2ak4 protein, mouseProlineProtein Serine-Threonine Kinases

Identifiers

PMID25857264
PMCPMC4572871
OpenAlexW1975517035

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.