Evidence map›Paper›PMID 25856106›Full record

ArticleThe New phytologist2015

Oakleaf: an S locus-linked mutation of Primula vulgaris that affects leaf and flower development.

Jonathan M Cocker, Margaret A Webster, Jinhong Li, Jonathan Wright, Gemy Kaithakottil, David Swarbreck, Philip M Gilmartin

Abstract read
In one paragraph

Article in The New phytologist, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

7 authors.

Jonathan M CockerSchool of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich, NR4 7TJ, UK.
Margaret A WebsterSchool of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich, NR4 7TJ, UK.
Jinhong LiSchool of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich, NR4 7TJ, UK.
Jonathan WrightThe Genome Analysis Centre, Norwich Research Park, Norwich, NR4 7UH, UK.
Gemy KaithakottilThe Genome Analysis Centre, Norwich Research Park, Norwich, NR4 7UH, UK.
David SwarbreckThe Genome Analysis Centre, Norwich Research Park, Norwich, NR4 7UH, UK.
Philip M GilmartinSchool of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich, NR4 7TJ, UK.

Funding

Biotechnology and Biological Sciences Research Council BB/H019278/1Biotechnology and Biological Sciences Research Council BB/H019278/2
6 · The paper itself

Abstract

In Primula vulgaris outcrossing is promoted through reciprocal herkogamy with insect-mediated cross-pollination between pin and thrum form flowers. Development of heteromorphic flowers is coordinated by genes at the S locus. To underpin construction of a genetic map facilitating isolation of these S locus genes, we have characterised Oakleaf, a novel S locus-linked mutant phenotype. We combine phenotypic observation of flower and leaf development, with classical genetic analysis and next-generation sequencing to address the molecular basis of Oakleaf. Oakleaf is a dominant mutation that affects both leaf and flower development; plants produce distinctive lobed leaves, with occasional ectopic meristems on the veins. This phenotype is reminiscent of overexpression of Class I KNOX-homeodomain transcription factors. We describe the structure and expression of all eight P. vulgaris PvKNOX genes in both wild-type and Oakleaf plants, and present comparative transcriptome analysis of leaves and flowers from Oakleaf and wild-type plants. Oakleaf provides a new phenotypic marker for genetic analysis of the Primula S locus. We show that none of the Class I PvKNOX genes are strongly upregulated in Oakleaf leaves and flowers, and identify cohorts of 507 upregulated and 314 downregulated genes in the Oakleaf mutant.

Indexed as

Genes, PlantGenetic LociMutationPhenotypeChromosome MappingDatabases, GeneticDNA, PlantFlowersGene ExpressionGenotypeMolecular Sequence DataPlant DevelopmentPlant LeavesPrimulaTranscriptomeDNA, PlantheterostylyKNOX genesOakleafPrimula vulgarisS locus

Identifiers

PMID25856106
PMCPMC4973830

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.