ArticleMolecules (Basel, Switzerland)2015
Potential of Start Codon Targeted (SCoT) markers to estimate genetic diversity and relationships among Chinese Elymus sibiricus accessions.
Article in Molecules (Basel, Switzerland), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.
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25 citing papers in PubMed.
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- Taxonomy and distribution ofPhytoKeys · 2023Article
- ISSR and SCoT for evaluation of hereditary differences of 29 wild plants in Al Jubail Saudi Arabian.Saudi journal of biological sciences · 2022Article
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- Genetic diversity analysis in a mini core collection of Damask rose (Rosa damascena Mill.) germplasm from Iran using URP and SCoT markers.Journal, genetic engineering & biotechnology · 2021Article
- Multiple DNA marker-assisted diversity analysis of Indian mango (Mangifera indica L.) populations.Scientific reports · 2021Article
- Phylogenetic relationships and DNA barcoding of nine endangered medicinal plant species endemic to Saint Katherine protectorate.Saudi journal of biological sciences · 2021Article
- DNA barcoding and genetic fidelity assessment of micropropagatedPhysiology and molecular biology of plants : an international journal of functional plant biology · 2020Article
- Molecular karyotyping of Siberian wild rye (Elymus sibiricus L.) with oligonucleotide fluorescence in situ hybridization (FISH) probes.PloS one · 2020Article
- Genetic characterization of Portuguese allochthonous populations ofPhysiology and molecular biology of plants : an international journal of functional plant biology · 2019Article
- Genetic diversity and structure ofHereditas · 2019Article
- Genetic diversity and population structure of Miscanthus lutarioriparius, an endemic plant of China.PloS one · 2019Article
- Genetic diversity and structure ofHereditas · 2019Article
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Abstract
Elymus sibiricus as an important forage grass and gene pool for improving cereal crops, that is widely distributed in West and North China. Information on its genetic diversity and relationships is limited but necessary for germplasm collection, conservation and future breeding. Start Codon Targeted (SCoT) markers were used for studying the genetic diversity and relationships among 53 E. sibiricus accessions from its primary distribution area in China. A total of 173 bands were generated from 16 SCoT primers, 159 bands of which were polymorphic with the percentage of polymorphic bands (PPB) of 91.91%. Based upon population structure analysis five groups were formed. The cluster analysis separated the accessions into two major clusters and three sub-clusters, similar to results of principal coordinate analysis (PCoA). The molecular variance analysis (AMOVA) showed that genetic variation was greater within geographical regions (50.99%) than between them (49.01%). Furthermore, the study also suggested that collecting and evaluating E. sibiricus germplasm for major geographic regions and special environments broadens the available genetic base and illustrates the range of variation. The results of the present study showed that SCoT markers were efficient in assessing the genetic diversity among E. sibiricus accessions.
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