Evidence map›Paper›PMID 25851418›Full record

ArticleJournal of peptide science : an official publication of the European Peptide Society2015

Curvature sensing MARCKS-ED peptides bind to membranes in a stereo-independent manner.

Lei Yan, Armando Jerome de Jesus, Ryo Tamura, Victoria Li, Kui Cheng, Hang Yin

Open access · greenAbstract read
In one paragraph

Article in Journal of peptide science : an official publication of the European Peptide Society, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Review
  3. Summary of Prof. Yin's CSEMV-EVCNA award lecture 2021.Extracellular vesicles and circulating nucleic acids · 2022
    Article
  4. Article
  5. Article
  6. Drugging Membrane Protein Interactions.Annual review of biomedical engineering · 2016
    Review
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Lei Yan *Center of Basic Molecular Science, Department of Chemistry, Tsinghua University, Beijing, China, 100082.
Armando Jerome de Jesus *Department of Chemistry and Biochemistry, the BioFrontiers Institute, University of Colorado Boulder, Boulder, Colorado 80309-0596, USA.
Ryo TamuraDepartment of Chemistry and Biochemistry, the BioFrontiers Institute, University of Colorado Boulder, Boulder, Colorado 80309-0596, USA.
Victoria LiDepartment of Chemistry and Biochemistry, the BioFrontiers Institute, University of Colorado Boulder, Boulder, Colorado 80309-0596, USA.
Kui ChengCenter of Basic Molecular Science, Department of Chemistry, Tsinghua University, Beijing, China, 100082.
Hang YinCenter of Basic Molecular Science, Department of Chemistry, Tsinghua University, Beijing, China, 100082.
University of Colorado Boulder · USTsinghua University · CN

Funding

Dissecting Cell Signaling Mediated by Protein-Protein Interactions in MembranesR01GM103843 · NIGMS · UNIVERSITY OF COLORADO · PI YIN, HANG HUBERT · 2013 to 2016
$1.3M
NIGMS NIH HHS R01 GM103843NIGMS NIH HHS R01GM103843
6 · The paper itself

Abstract

Membrane curvature and lipid composition plays a critical role in interchanging of matter and energy in cells. Peptide curvature sensors are known to activate signaling pathways and promote molecular transport across cell membranes. Recently, the 25-mer MARCKS-ED peptide, which is derived from the effector domain of the myristoylated alanine-rich C kinase substrate protein, has been reported to selectively recognize highly curved membrane surfaces. Our previous studies indicated that the naturally occurring L-MARCKS-ED peptide could simultaneously detect both phosphatidylserine and curvature. Here, we demonstrate that D-MARCKS-ED, composed by unnatural D-amino acids, has the same activities as its enantiomer, L-MARCKS-ED, as a curvature and lipid sensor. An atomistic molecular dynamics simulation suggests that D-MARCKS-ED may change from linear to a boat conformation upon binding to the membrane. Comparable enhancement of fluorescence intensity was observed between D- and L-MARCKS-ED peptides, indicating similar binding affinities. Meanwhile, circular dichroism spectra of D- and L-MARCKS-ED are almost symmetrical both in the presence and absence of liposomes. These results suggest similar behavior of artificial D- and natural L-MARCKS-ED peptides when binding to curved membranes. Our studies may contribute to further understanding of how MARCKS-ED senses membrane curvature as well as provide a new direction to develop novel membrane curvature probes.

Indexed as

BenzofuransFluorescent DyesIntracellular Signaling Peptides and ProteinsLipid BilayersLiposomesMembrane ProteinsMolecular Dynamics SimulationMyristoylated Alanine-Rich C Kinase SubstratePhosphatidylserinesProtein BindingProtein ConformationSpectrometry, FluorescenceStereoisomerismThermodynamicsBenzofuransFluorescent DyesIntracellular Signaling Peptides and ProteinsLipid BilayersLiposomesMembrane ProteinsMyristoylated Alanine-Rich C Kinase SubstratePhosphatidylserinesMARCKS-EDmembrane curvaturesimulationunnatural peptides

Identifiers

PMID25851418
PMCPMC4480065
OpenAlexW1948259362

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.