Evidence map›Paper›PMID 25849813›Full record

ArticlePloS one2015

Single bacteria movement tracking by online microscopy--a proof of concept study.

Andreas Ziegler, Daniel Schock-Kusch, Dominik Bopp, Sandra Dounia, Matthias Rädle, Ulf Stahl

Abstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Andreas ZieglerInstitute for Process Control and Innovative Energy Conversion, Mannheim University of Applied Sciences, Mannheim, Germany.
Daniel Schock-KuschInstitute for Process Control and Innovative Energy Conversion, Mannheim University of Applied Sciences, Mannheim, Germany.
Dominik BoppInstitute for Process Control and Innovative Energy Conversion, Mannheim University of Applied Sciences, Mannheim, Germany.
Sandra DouniaDepartment of Applied and Molecular Microbiology, Berlin University of Technology, Berlin, Germany; Research Institute for Special Microbiology, Research and Teaching Institute for Brewing in Berlin, Berlin, Germany.
Matthias RädleInstitute for Process Control and Innovative Energy Conversion, Mannheim University of Applied Sciences, Mannheim, Germany.
Ulf StahlDepartment of Applied and Molecular Microbiology, Berlin University of Technology, Berlin, Germany; Research Institute for Special Microbiology, Research and Teaching Institute for Brewing in Berlin, Berlin, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this technical report we demonstrate a low-cost online unit allowing movement tracking of flagellated bacteria on a single-cell level during fermentation processes. The system's ability to distinguish different metabolic states (viability) of bacteria by movement velocity was investigated. A flow-through cuvette with automatically adjustable layer thickness was developed. The cuvette can be used with most commercially available laboratory microscopes equipped with 40× amplification and a digital camera. In addition, an automated sample preparation unit and a software module was developed measuring size, moved distance, and speed of bacteria. In a proof of principle study the movement velocities of Bacillus amyloliquefaciens FZB42 during three batch fermentation processes were investigated. In this process the bacteria went through different metabolic states, vegetative growth, diauxic shift, vegetative growth after diauxic shift, and sporulation. It was shown that the movement velocities during the different metabolic states significantly differ from each other. Therefore, the described setup has the potential to be used as a bacteria viability monitoring tool. In contrast to some other techniques, such as electro-optical techniques, this method can even be used in turbid production media.

Indexed as

MovementBacillusBatch Cell Culture TechniquesFlagellaImage Processing, Computer-AssistedMicroscopySingle-Cell AnalysisStress, Mechanical

Identifiers

PMID25849813
PMCPMC4388530

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.