ArticlePloS one2015
Genome-wide analysis of the AP2/ERF family in Eucalyptus grandis: an intriguing over-representation of stress-responsive DREB1/CBF genes.
Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.
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Who cites it
20 citing papers in PubMed, 46 citations in OpenAlex.
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- Identification and Expression Analysis of theLife (Basel, Switzerland) · 2026Article
- Comprehensive characterization of the genes in AP2/ERF family and their involvement in salt-alkali stress response duringFrontiers in plant science · 2026Article
- Genome-Wide Identification and Expression Divergence ofLife (Basel, Switzerland) · 2025Article
- Overexpression ofInternational journal of molecular sciences · 2023Article
- Identification and Analysis of theInternational journal of molecular sciences · 2023Article
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- Comprehensive In Silico Analysis and Transcriptional Profiles Highlight the Importance of Mitochondrial Dicarboxylate Carriers (DICs) on Hypoxia Response in BothPlants (Basel, Switzerland) · 2022Article
- Genome-Wide Analysis of RAV Transcription Factors and Functional Characterization of Anthocyanin-Biosynthesis-RelatedInternational journal of molecular sciences · 2021Article
- Identification, classification, and characterization of AP2/ERF superfamily genes in Masson pine (Pinus massoniana Lamb.).Scientific reports · 2021Article
- Characterization ofPlants (Basel, Switzerland) · 2020Article
- Wood Architecture and Composition Are Deeply Remodeled in Frost SensitiveInternational journal of molecular sciences · 2020Article
- Characterization of the AP2/ERF Transcription Factor Family and Expression Profiling of DREB Subfamily under Cold and Osmotic Stresses inPlants (Basel, Switzerland) · 2020Article
- Impact of Combined Heat and Drought Stress on the Potential Growth Responses of the Desert GrassPlants (Basel, Switzerland) · 2019Article
- Article
- Transcriptomic changes reveal gene networks responding to the overexpression of a blueberry DWARF AND DELAYED FLOWERING 1 gene in transgenic blueberry plants.BMC plant biology · 2017Article
- Regulation of Apetala2/Ethylene Response Factors in Plants.Frontiers in plant science · 2017Review
- Insight into the AP2/ERF transcription factor superfamily in sesame and expression profiling of DREB subfamily under drought stress.BMC plant biology · 2016Article
- The transcriptional landscape of insect galls: psyllid (Hemiptera) gall formation in Hawaiian Metrosideros polymorpha (Myrtaceae).BMC genomics · 2015Article
- Genome-wide investigation and expression analysis of AP2-ERF gene family in salt tolerant common bean.EXCLI journal · 2015Article
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Authors and funding
8 authors at 4 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundThe AP2/ERF family includes a large number of developmentally and physiologically important transcription factors sharing an AP2 DNA-binding domain. Among them DREB1/CBF and DREB2 factors are known as master regulators respectively of cold and heat/osmotic stress responses. EXPERIMENTAL APPROACHES: The manual annotation of AP2/ERF family from Eucalyptus grandis, Malus, Populus and Vitis genomes allowed a complete phylogenetic study for comparing the structure of this family in woody species and the model Arabidopsis thaliana. Expression profiles of the whole groups of EgrDREB1 and EgrDREB2 were investigated through RNAseq database survey and RT-qPCR analyses.
resultsThe structure and the size of the AP2/ERF family show a global conservation for the plant species under comparison. In addition to an expansion of the ERF subfamily, the tree genomes mainly differ with respect to the group representation within the subfamilies. With regard to the E. grandis DREB subfamily, an obvious feature is the presence of 17 DREB1/CBF genes, the maximum reported to date for dicotyledons. In contrast, only six DREB2 have been identified, which is similar to the other plants species under study, except for Malus. All the DREB1/CBF and DREB2 genes from E. grandis are expressed in at least one condition and all are heat-responsive. Regulation by cold and drought depends on the genes but is not specific of one group; DREB1/CBF group is more cold-inducible than DREB2 which is mainly drought responsive.
conclusionThese features suggest that the dramatic expansion of the DREB1/CBF group might be related to the adaptation of this evergreen tree to climate changes when it expanded in Australia.
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