ArticlePloS one2015
The complete chloroplast and mitochondrial genomes of the green macroalga Ulva sp. UNA00071828 (Ulvophyceae, Chlorophyta).
Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.
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34 citing papers in PubMed, 68 citations in OpenAlex.
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- Phylogenetic relationships among seven freshwater red algal genera in the Batrachospermaceae (Batrachospermales, Rhodophyta) using complete chloroplast genome data.Journal of phycology · 2025Article
- Phylogenetic classification and genetic insights from the complete mitochondrial genome ofFrontiers in plant science · 2025Article
- Novel insights into chloroplast genome evolution in the green macroalgal genusFrontiers in plant science · 2023Article
- Tandem integration of circular plasmid contributes significantly to the expanded mitochondrial genomes of the green-tide forming algaFrontiers in plant science · 2022Article
- The organellar genomes of Silvetia siliquosa (Fucales, Phaeophyceae) and comparative analyses of the brown algae.PloS one · 2022Article
- Characterization of complete chloroplast genome ofMitochondrial DNA. Part B, Resources · 2022Article
- Large Phylogenomic Data sets Reveal Deep Relationships and Trait Evolution in Chlorophyte Green Algae.Genome biology and evolution · 2021Article
- Complete chloroplast genome ofMitochondrial DNA. Part B, Resources · 2021Article
- Six Newly Sequenced Chloroplast Genomes From Trentepohliales: The Inflated Genomes, Alternative Genetic Code and Dynamic Evolution.Frontiers in plant science · 2021Article
- Screening and verification of extranuclear genetic markers in green tide algae from the Yellow Sea.PloS one · 2021Article
- Phylogenomic analysis of the chloroplast genome of the green-tide forming macroalgaMitochondrial DNA. Part B, Resources · 2021Article
- Engaging the next generation of plant geneticists through sustained research: an overview of a post-16 project.Heredity · 2020Review
- Phylogenetic analysis of the complete chloroplast genome ofMitochondrial DNA. Part B, Resources · 2020Article
- Evolutionary Trends in the Mitochondrial Genome of Archaeplastida: How Does the GC Bias Affect the Transition from Water to Land?Plants (Basel, Switzerland) · 2020Article
- The complete mitochondrial genome sequence ofMitochondrial DNA. Part B, Resources · 2020Article
- Characterization of the Chloroplast Genome ofInternational journal of molecular sciences · 2019Article
- A siphonous macroalgal genome suggests convergent functions of homeobox genes in algae and land plants.DNA research : an international journal for rapid publication of reports on genes and genomes · 2019Article
- Comparative study on mitogenomes of green tide algae.Genetica · 2018Article
- Characterization of the complete chloroplast genome ofMitochondrial DNA. Part B, Resources · 2018Article
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Authors and funding
4 authors at 1 institution in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Sequencing mitochondrial and chloroplast genomes has become an integral part in understanding the genomic machinery and the phylogenetic histories of green algae. Previously, only three chloroplast genomes (Oltmannsiellopsis viridis, Pseudendoclonium akinetum, and Bryopsis hypnoides) and two mitochondrial genomes (O. viridis and P. akinetum) from the class Ulvophyceae have been published. Here, we present the first chloroplast and mitochondrial genomes from the ecologically and economically important marine, green algal genus Ulva. The chloroplast genome of Ulva sp. was 99,983 bp in a circular-mapping molecule that lacked inverted repeats, and thus far, was the smallest ulvophycean plastid genome. This cpDNA was a highly compact, AT-rich genome that contained a total of 102 identified genes (71 protein-coding genes, 28 tRNA genes, and three ribosomal RNA genes). Additionally, five introns were annotated in four genes: atpA (1), petB (1), psbB (2), and rrl (1). The circular-mapping mitochondrial genome of Ulva sp. was 73,493 bp and follows the expanded pattern also seen in other ulvophyceans and trebouxiophyceans. The Ulva sp. mtDNA contained 29 protein-coding genes, 25 tRNA genes, and two rRNA genes for a total of 56 identifiable genes. Ten introns were annotated in this mtDNA: cox1 (4), atp1 (1), nad3 (1), nad5 (1), and rrs (3). Double-cut-and-join (DCJ) values showed that organellar genomes across Chlorophyta are highly rearranged, in contrast to the highly conserved organellar genomes of the red algae (Rhodophyta). A phylogenomic investigation of 51 plastid protein-coding genes showed that Ulvophyceae is not monophyletic, and also placed Oltmannsiellopsis (Oltmannsiellopsidales) and Tetraselmis (Chlorodendrophyceae) closely to Ulva (Ulvales) and Pseudendoclonium (Ulothrichales).
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