Evidence map›Paper›PMID 25848822›Full record

ArticleJournal of the American Chemical Society2015

A "Smart" ¹²⁸Xe NMR Biosensor for pH-Dependent Cell Labeling.

Brittany A Riggle, Yanfei Wang, Ivan J Dmochowski

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Fast Ion-Chelate Dissociation Rate forJournal of the American Chemical Society · 2021
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Molecular Sensing with Host Systems for HyperpolarizedMolecules (Basel, Switzerland) · 2020
    Review
  13. Analytical chemistry · 2020
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Cryptophane Nanoscale Assemblies ExpandAnalytical chemistry · 2018
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Brittany A RiggleDepartment of Chemistry, University of Pennsylvania, 231 South 34th Street, Philadelphia, Pennsylvania 19104-6323, United States.
Yanfei WangDepartment of Chemistry, University of Pennsylvania, 231 South 34th Street, Philadelphia, Pennsylvania 19104-6323, United States.
Ivan J DmochowskiDepartment of Chemistry, University of Pennsylvania, 231 South 34th Street, Philadelphia, Pennsylvania 19104-6323, United States.

Funding

Structure-Based Design of Xe-129 NMR Biosensors for Multiplexed Cancer DetectionR01GM097478 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI DMOCHOWSKI, IVAN JULIAN · 2011 to 2018
$3.1M
NIGMS NIH HHS GM097478S1NIGMS NIH HHS R01 GM097478NIGMS NIH HHS R01-GM097478
6 · The paper itself

Abstract

Here we present a "smart" xenon-129 NMR biosensor that undergoes a peptide conformational change and labels cells in acidic environments. To a cryptophane host molecule with high Xe affinity, we conjugated a 30mer EALA-repeat peptide that is α-helical at pH 5.5 and disordered at pH 7.5. The (129)Xe NMR chemical shift at room temperature was strongly pH-dependent (Δδ = 3.4 ppm): δ = 64.2 ppm at pH 7.5 vs δ = 67.6 ppm at pH 5.5, where Trp(peptide)-cryptophane interactions were evidenced by Trp fluorescence quenching. Using hyper-CEST NMR, we probed peptidocryptophane detection limits at low-picomolar (10(-11) M) concentration, which compares favorably to other NMR pH reporters at 10(-2)-10(-3) M. Finally, in biosensor-HeLa cell solutions, peptide-cell membrane insertion at pH 5.5 generated a 13.4 ppm downfield cryptophane-(129)Xe NMR chemical shift relative to pH 7.5 studies. This highlights new uses for (129)Xe as an ultrasensitive probe of peptide structure and function, along with potential applications for pH-dependent cell labeling in cancer diagnosis and treatment.

Indexed as

Amino Acid SequenceBiosensing TechniquesHeLa CellsHumansHydrogen-Ion ConcentrationModels, MolecularMolecular Sequence DataNeoplasmsNuclear Magnetic Resonance, BiomolecularPeptidesPolycyclic CompoundsProtein Structure, SecondaryXenon IsotopescryptophanePeptidesPolycyclic CompoundsXenon Isotopes

Identifiers

PMID25848822
PMCPMC4976068

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.