Evidence map›Paper›PMID 25848219›Full record

ArticleDrug design, development and therapy2015

Pharmacoinformatics approach for investigation of alternative potential hepatitis C virus nonstructural protein 5B inhibitors.

Muhammad Usman Mirza, Noor-Ul-Huda Ghori, Nazia Ikram, Abdur Rehman Adil, Sadia Manzoor

Abstract read
In one paragraph

Article in Drug design, development and therapy, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Review
  2. Wound Healing Potential and In Silico Appraisal ofBioMed research international · 2022
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  4. BioMed research international · 2021
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  5. Review
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  7. Herbal Medicinal Products fromTheScientificWorldJournal · 2020
    Review
  8. Quantification of Berberine inAntioxidants (Basel, Switzerland) · 2019
    Article
  9. Article
  10. Article
  11. Potential Anti-Cancer Flavonoids Isolated FromBioinformatics and biology insights · 2019
    Article
  12. Article
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Muhammad Usman MirzaCentre for Research in Molecular Medicine (CRiMM), The University of Lahore, Lahore, Pakistan.
Noor-Ul-Huda GhoriAtta-ur-Rehman School of Applied Biosciences (ASAB), National University of Science and Technology, Islamabad, Pakistan.
Nazia IkramInstitute of Molecular Biology and Biotechnology (IMBB), The University of Lahore, Lahore, Pakistan.
Abdur Rehman AdilCentre for Excellence in Molecular Biology (CEMB), The University of Punjab, Lahore, Pakistan.
Sadia ManzoorInstitute of Molecular Biology and Biotechnology (IMBB), The University of Lahore, Lahore, Pakistan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hepatitis C virus (HCV) is one of the major viruses affecting the world today. It is a highly variable virus, having a rapid reproduction and evolution rate. The variability of genomes is due to hasty replication catalyzed by nonstructural protein 5B (NS5B) which is also a potential target site for the development of anti-HCV agents. Recently, the US Food and Drug Administration approved sofosbuvir as a novel oral NS5B inhibitor for the treatment of HCV. Unfortunately, it is much highlighted for its pricing issues. Hence, there is an urgent need to scrutinize alternate therapies against HCV that are available at affordable price and do not have associated side effects. Such a need is crucial especially in underdeveloped countries. The search for various new bioactive compounds from plants is a key part of pharmaceutical research. In the current study, we applied a pharmacoinformatics-based approach for the identification of active plant-derived compounds against NS5B. The results were compared to docking results of sofosbuvir. The lead compounds with high-binding ligands were further analyzed for pharmacokinetic and pharmacodynamic parameters based on in silico absorption, distribution, metabolism, excretion, and toxicity (ADMET) profile. The results showed the potential alternative lead compounds that can be developed into commercial drugs having high binding energy and promising ADMET properties.

Indexed as

Medical InformaticsAntiviral AgentsHepacivirusLigandsMolecular Docking SimulationRNA-Dependent RNA PolymeraseViral Nonstructural ProteinsAntiviral AgentsLigandsNS-5 protein, hepatitis C virusRNA-Dependent RNA PolymeraseViral Nonstructural ProteinsADMETAutoDock Vinahepatitis Cmolecular dockingNS5B inhibitorsphytochemicalssofosbuvir

Identifiers

PMID25848219
PMCPMC4383224

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.