Evidence map›Paper›PMID 25848090›Full record

ArticleMolecular and cellular biology2015

Histone methyltransferase Setd8 represses Gata2 expression and regulates erythroid maturation.

Jeffrey Malik, Michael Getman, Laurie A Steiner

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 30 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Jeffrey MalikUniversity of Rochester Medical Center, Department of Pediatrics, Center for Pediatric Biomedical Research, Rochester, New York, USA.
Michael GetmanUniversity of Rochester Medical Center, Department of Pediatrics, Center for Pediatric Biomedical Research, Rochester, New York, USA.
Laurie A SteinerUniversity of Rochester Medical Center, Department of Pediatrics, Center for Pediatric Biomedical Research, Rochester, New York, USA Laurie_Steiner@urmc.rochester.edu.
University of Rochester Medical Center · US

Funding

Identification of a Molecular Signature for Barrier InsulatorsK08DK090153 · NIDDK · YALE UNIVERSITY · PI STEINER, LAURIE A. · 2011 to 2013
$450k
NIDDK NIH HHS K08 DK090153
6 · The paper itself

Abstract

Setd8 is the sole histone methyltransferase in mammals capable of monomethylating histone H4 lysine 20 (H4K20me1). Setd8 is expressed at significantly higher levels in erythroid cells than any other cell or tissue type, suggesting that Setd8 has an erythroid-cell-specific function. To test this hypothesis, stable Setd8 knockdown was established in extensively self-renewing erythroblasts (ESREs), a well-characterized, nontransformed model of erythroid maturation. Knockdown of Setd8 resulted in impaired erythroid maturation characterized by a delay in hemoglobin accumulation, larger mean cell area, persistent ckit expression, incomplete nuclear condensation, and lower rates of enucleation. Setd8 knockdown did not alter ESRE proliferation or viability or result in accumulation of DNA damage. Global gene expression analyses following Setd8 knockdown demonstrated that in erythroid cells, Setd8 functions primarily as a repressor. Most notably, Gata2 expression was significantly higher in knockdown cells than in control cells and Gata2 knockdown rescued some of the maturation impairments associated with Setd8 disruption. Setd8 occupies critical regulatory elements in the Gata2 locus, and knockdown of Setd8 resulted in loss of H4K20me1 and gain of H4 acetylation at the Gata2 1S promoter. These results suggest that Setd8 is an important regulator of erythroid maturation that works in part through repression of Gata2 expression.

Indexed as

Gene Expression Regulation, DevelopmentalAcetylationAnimalsCells, CulturedErythroblastsErythroid CellsErythropoiesisGATA2 Transcription FactorHistone-Lysine N-MethyltransferaseHistonesMiceMice, Inbred C57BLPromoter Regions, GeneticRNA InterferenceRNA, Small InterferingGATA2 Transcription FactorHistone-Lysine N-MethyltransferaseHistonesKMT5a protein, mouseRNA, Small Interfering

Identifiers

PMID25848090
PMCPMC4438238
OpenAlexW2053541538

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.