Evidence map›Paper›PMID 25847947›Full record

ArticleThe Journal of experimental medicine2015

DUSP4 deficiency caused by promoter hypermethylation drives JNK signaling and tumor cell survival in diffuse large B cell lymphoma.

Corina A Schmid, Mark D Robinson, Nicole A Scheifinger, Sebastian Müller, Sergio Cogliatti, Alexandar Tzankov, Anne Müller

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of experimental medicine, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 69 citations in OpenAlex.

  1. Article
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  4. Genetic and Epigenetic Aberrations ofCurrent issues in molecular biology · 2025
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  6. Article
  7. Article
  8. Review
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  11. Review
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  14. Selective inhibitors for JNK signalling: a potential targeted therapy in cancer.Journal of enzyme inhibition and medicinal chemistry · 2020
    Review
  15. Article
  16. Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Corina A SchmidInstitute of Molecular Cancer Research, Institute of Molecular Life Sciences, and Swiss Institute of Bioinformatics (SIB), University of Zürich, 8057 Zürich, Switzerland.
Mark D RobinsonInstitute of Molecular Cancer Research, Institute of Molecular Life Sciences, and Swiss Institute of Bioinformatics (SIB), University of Zürich, 8057 Zürich, Switzerland Institute of Molecular Cancer Research, Institute of Molecular Life Sciences, and Swiss Institute of Bioinformatics (SIB), University of Zürich, 8057 Zürich, Switzerland.
Nicole A ScheifingerInstitute of Molecular Cancer Research, Institute of Molecular Life Sciences, and Swiss Institute of Bioinformatics (SIB), University of Zürich, 8057 Zürich, Switzerland.
Sebastian MüllerInstitute of Food, Nutrition, and Health and Institute of Molecular Systems Biology, Swiss Federal Institute of Technology Zürich (ETHZ), 8093 Zürich, Switzerland Institute of Food, Nutrition, and Health and Institute of Molecular Systems Biology, Swiss Federal Institute of Technology Zürich (ETHZ), 8093 Zürich, Switzerland.
Sergio CogliattiInstitute of Pathology, Cantonal Hospital of St. Gallen, 9007 St. Gallen, Switzerland.
Alexandar TzankovInstitute of Pathology, University Hospital Basel, 4031 Basel, Switzerland.
Anne MüllerInstitute of Molecular Cancer Research, Institute of Molecular Life Sciences, and Swiss Institute of Bioinformatics (SIB), University of Zürich, 8057 Zürich, Switzerland mueller@imcr.uzh.ch.
SIB Swiss Institute of Bioinformatics · CHUniversity Hospital of Basel · CHUniversity of St. Gallen · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The epigenetic dysregulation of tumor suppressor genes is an important driver of human carcinogenesis. We have combined genome-wide DNA methylation analyses and gene expression profiling after pharmacological DNA demethylation with functional screening to identify novel tumor suppressors in diffuse large B cell lymphoma (DLBCL). We find that a CpG island in the promoter of the dual-specificity phosphatase DUSP4 is aberrantly methylated in nodal and extranodal DLBCL, irrespective of ABC or GCB subtype, resulting in loss of DUSP4 expression in 75% of >200 examined cases. The DUSP4 genomic locus is further deleted in up to 13% of aggressive B cell lymphomas, and the lack of DUSP4 is a negative prognostic factor in three independent cohorts of DLBCL patients. Ectopic expression of wild-type DUSP4, but not of a phosphatase-deficient mutant, dephosphorylates c-JUN N-terminal kinase (JNK) and induces apoptosis in DLBCL cells. Pharmacological or dominant-negative JNK inhibition restricts DLBCL survival in vitro and in vivo and synergizes strongly with the Bruton's tyrosine kinase inhibitor ibrutinib. Our results indicate that DLBCL cells depend on JNK signaling for survival. This finding provides a mechanistic basis for the clinical development of JNK inhibitors in DLBCL, ideally in synthetic lethal combinations with inhibitors of chronic active B cell receptor signaling.

Indexed as

DNA MethylationPromoter Regions, GeneticSignal TransductionAnimalsApoptosisCell Line, TumorCell SurvivalCpG IslandsDNA, NeoplasmDual-Specificity PhosphatasesFemaleHumansLymphoma, Large B-Cell, DiffuseMaleMAP Kinase Kinase 4MiceDNA, NeoplasmDual-Specificity PhosphatasesDUSP4 protein, humanMAP Kinase Kinase 4Mitogen-Activated Protein Kinase PhosphatasesNeoplasm Proteins

Identifiers

PMID25847947
PMCPMC4419353
OpenAlexW2142682046

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.