Evidence map›Paper›PMID 25846871›Full record

ArticleJournal of genetics2015

Genetic variability of CYP2C19 in a Mexican population: contribution to the knowledge of the inheritance pattern of CYP2C19*17 to develop the ultrarapid metabolizer phenotype.

Alma Faviola Favela-Mendoza, Gabriela Martinez-Cortes, Marcelo Hernandez-Zaragoza, Joel Salazar-Flores, Jose Francisco Muñoz-Valle, Victor Manuel Martinez-Sevilla, Noemi Yolanda Velazquez-Suarez, Hector Rangel-Villalobos

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Article in Journal of genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.8field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Article
  3. Observational
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  5. Article
  6. Article
  7. Evaluation ofPharmacogenomics and personalized medicine · 2021
    Article
  8. Article
  9. Article
  10. Analysis of CYP2C19 Genetic Polymorphism in a Large Ethnic Hakka Population in Southern China.Medical science monitor : international medical journal of experimental and clinical research · 2017
    Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Alma Faviola Favela-MendozaInstituto de Investigacion en Genetica Molecular, Centro Universitario de la Cienega, Universidad de Guadalajara (CUCienega-UdeG), Av. Universidad #1115, Col. Lindavista, Ocotlan, Jalisco CP 47810, Mexico. hrangel13@hotmail.com.
Gabriela Martinez-Cortes
Marcelo Hernandez-Zaragoza
Joel Salazar-Flores
Jose Francisco Muñoz-Valle
Victor Manuel Martinez-Sevilla
Noemi Yolanda Velazquez-Suarez
Hector Rangel-Villalobos
Universidad de Guadalajara · MXUniversidad de la Ciénega · MX

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

CYP2C19 is a polymorphic enzyme that metabolizes a wide variety of therapeutic drugs that has been associated with altered enzymatic activity and adverse drug reactions. Differences in allele frequencies of the CYP2C19 gene have been detected in populations worldwide. Thus, we analysed the alleles CYP2C19*2, CYP2C19*3, CYP2C19*4 and CYP2C19*5 related to the poor metabolizer (PM) phenotype in a Mexican population sample (n = 238), as well as CYP2C19*17, unique allele related to ultrarapid metabolizer phenotype (UMs). Genotypes were determined using SNaPshot and TaqManqPCR assays. In addition to the wild-type CYP2C19*1 allele (77.1%), we only found CYP2C19*17 (14.3%) and CYP2C19*2 (8.6%). Comparison with previous population reports demonstrated that these two SNPs are homogeneously distributed in Latin America (P > 0.05). Based on comparison with a previous pharmacokinetic study that determined the frequency of CYP2C19 phenotypes in the same population (western Mexican), we obtained the following findings: (i) based on the difference between the frequency of genotypes CYP2C19*2/*2 (presumably PM) versus the observed prevalence of PM phenotypes (0.4 versus 6.3%; Χ(2) = 9.58, P = 0.00196), we inferred the plausible presence of novel CYP2C19 alleles related to the PM phenotype; (ii) the prevalence of UMs was in disagreement with the dominant inheritance pattern suggested for CYP2C19*17 (23.1 versus 4%; P < 0.00001); (iii) the apparent recessive inheritance pattern of CYP2C19*17, based on the agreement between homozygous CYP2C19*17/*17 (presumably UMs) and the observed prevalence of UMs (2.1 versus 4%; (Χ(2) = 1.048; P = 0.306).

Indexed as

Cytochrome P-450 CYP2C19Gene FrequencyHumansInactivation, MetabolicMexicoPolymorphism, GeneticPolymorphism, Single NucleotideCYP2C19 protein, humanCytochrome P-450 CYP2C19

Identifiers

PMID25846871
OpenAlexW2114331773

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.