Evidence map›Paper›PMID 25846201›Full record

ArticlePlant biotechnology journal2016

Improving cold storage and processing traits in potato through targeted gene knockout.

Benjamin M Clasen, Thomas J Stoddard, Song Luo, Zachary L Demorest, Jin Li, Frederic Cedrone, Redeat Tibebu, Shawn Davison, Erin E Ray, Aurelie Daulhac and 8 more

Open access · bronzeAbstract read
In one paragraph

Article in Plant biotechnology journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 124 papers.

0numbers the graph read from it
0cells of the map it votes in
124citing papers in PubMed
50.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

124 citing papers in PubMed, 402 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Article
  5. CRISPR-Cas Gene Editing Technology in Potato.International journal of molecular sciences · 2025
    Review
  6. Review
  7. Article
  8. Review
  9. Review
  10. Review
  11. Review
  12. Review
  13. Review
  14. CRISPR/Cas9-mediated genome editing technique to control fall armyworm (Physiology and molecular biology of plants : an international journal of functional plant biology · 2024
    Review
  15. Article
  16. Article
  17. Review
  18. Review
  19. Review
  20. Review

64 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 1 institution in 1 country.

Benjamin M ClasenCellectis plant sciences Inc., New Brighton, MN, USA.
Thomas J StoddardCellectis plant sciences Inc., New Brighton, MN, USA.
Song LuoCellectis plant sciences Inc., New Brighton, MN, USA.
Zachary L DemorestCellectis plant sciences Inc., New Brighton, MN, USA.
Jin LiCellectis plant sciences Inc., New Brighton, MN, USA.
Frederic CedroneCellectis SA, Paris, France.
Redeat TibebuCellectis plant sciences Inc., New Brighton, MN, USA.
Shawn DavisonCellectis plant sciences Inc., New Brighton, MN, USA.
Erin E RayCellectis plant sciences Inc., New Brighton, MN, USA.
Aurelie DaulhacCellectis plant sciences Inc., New Brighton, MN, USA.
Andrew CoffmanCellectis plant sciences Inc., New Brighton, MN, USA.
Ann YabandithCellectis plant sciences Inc., New Brighton, MN, USA.
Adam RetterathCellectis plant sciences Inc., New Brighton, MN, USA.
William HaunCellectis plant sciences Inc., New Brighton, MN, USA.
Nicholas J BaltesCellectis plant sciences Inc., New Brighton, MN, USA.
Luc MathisCellectis plant sciences Inc., New Brighton, MN, USA.
Daniel F VoytasCellectis plant sciences Inc., New Brighton, MN, USA.
Feng ZhangCellectis plant sciences Inc., New Brighton, MN, USA.
Cellectis (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cold storage of potato tubers is commonly used to reduce sprouting and extend postharvest shelf life. However, cold temperature stimulates the accumulation of reducing sugars in potato tubers. Upon high-temperature processing, these reducing sugars react with free amino acids, resulting in brown, bitter-tasting products and elevated levels of acrylamide--a potential carcinogen. To minimize the accumulation of reducing sugars, RNA interference (RNAi) technology was used to silence the vacuolar invertase gene (VInv), which encodes a protein that breaks down sucrose to glucose and fructose. Because RNAi often results in incomplete gene silencing and requires the plant to be transgenic, here we used transcription activator-like effector nucleases (TALENs) to knockout VInv within the commercial potato variety, Ranger Russet. We isolated 18 plants containing mutations in at least one VInv allele, and five of these plants had mutations in all VInv alleles. Tubers from full VInv-knockout plants had undetectable levels of reducing sugars, and processed chips contained reduced levels of acrylamide and were lightly coloured. Furthermore, seven of the 18 modified plant lines appeared to contain no TALEN DNA insertions in the potato genome. These results provide a framework for using TALENs to quickly improve traits in commercially relevant autotetraploid potato lines.

Indexed as

Cold TemperatureGene Knockout TechniquesGene TargetingAcrylamideBase Sequencebeta-FructofuranosidaseCarbohydratesCryopreservationGenes, PlantMutationPlants, Genetically ModifiedSolanum tuberosumTranscription Activator-Like Effector NucleasesVacuolesAcrylamidebeta-FructofuranosidaseCarbohydratesTranscription Activator-Like Effector Nucleasesacrylamide reductioncold-induced sweeteninggene editingpotatotranscription activator-like effector nucleasesvacuolar invertase

Identifiers

PMID25846201
PMCPMC11389148
OpenAlexW2130103528

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.