Evidence map›Paper›PMID 25845878›Full record

ArticleAntimicrobial agents and chemotherapy2015

Profiling of β-lactam selectivity for penicillin-binding proteins in Streptococcus pneumoniae D39.

Ozden Kocaoglu, Ho-Ching T Tsui, Malcolm E Winkler, Erin E Carlson

Open access · bronzeAbstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 75 papers.

0numbers the graph read from it
0cells of the map it votes in
75citing papers in PubMed
5.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

75 citing papers in PubMed, 116 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Activity Profiling of Mycobacterial L,D-Transpeptidases.bioRxiv : the preprint server for biology · 2026
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Specific variants inMicrobiology spectrum · 2025
    Article
  14. Article
  15. Review
  16. Combining live fluorescence imaging with in situ cryoelectron tomography sheds light on the septation process inProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  17. Article
  18. Article
  19. ACS infectious diseases · 2024
    Article
  20. Elongasome core proteins and class A PBP1a display zonal, processive movement at the midcell ofProceedings of the National Academy of Sciences of the United States of America · 2024
    Article

15 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Ozden KocaogluDepartment of Molecular and Cellular Biochemistry, Indiana University, Bloomington, Indiana, USA.
Ho-Ching T TsuiDepartment of Biology, Indiana University, Bloomington, Indiana, USA.
Malcolm E WinklerDepartment of Molecular and Cellular Biochemistry, Indiana University, Bloomington, Indiana, USA Department of Biology, Indiana University, Bloomington, Indiana, USA.
Erin E CarlsonDepartment of Molecular and Cellular Biochemistry, Indiana University, Bloomington, Indiana, USA Department of Chemistry, Indiana University, Bloomington, Indiana, USA carlsone@umn.edu.
Indiana University Bloomington · US

Funding

Dynamics of bacterial peptidoglycan synthesisR01GM113172 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI BRUN, YVES V, VANNIEUWENHZE, MICHAEL S · 2015 to 2018
$3.5M
Targeted natural product diversification to identify novel antibacterial agentsDP2OD008592 · OD · UNIVERSITY OF MINNESOTA · PI CARLSON, ERIN ELIZABETH · 2011 to 2011
$2.2M
Functions of Pneumococcal Murein Hydrolases Required for Division and VirulenceR56AI107075 · NIAID · TRUSTEES OF INDIANA UNIVERSITY · PI WINKLER, MALCOLM E. · 2014 to 2014
$385k
NIAID NIH HHS AI107075NIAID NIH HHS R56 AI107075NIGMS NIH HHS GM113172NIGMS NIH HHS R01 GM113172NIH HHS DP2 OD008592NIH HHS DP2OD008592
6 · The paper itself

Abstract

Selective fluorescent β-lactam chemical probes enable the visualization of the transpeptidase activity of penicillin-binding proteins (PBPs) at different stages of bacterial cell division. To facilitate the development of new fluorescent probes for PBP imaging, we evaluated 20 commercially available β-lactams for selective PBP inhibition in an unencapsulated derivative of the D39 strain of Streptococcus pneumoniae. Live cells were treated with β-lactam antibiotics at different concentrations and subsequently incubated with Bocillin FL (Boc-FL; fluorescent penicillin) to saturate uninhibited PBPs. Fluorophore-labeled PBPs were visualized by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and fluorescence scanning. Among 20 compounds tested, carbapenems (doripenem and meropenem) were coselective for PBP1a, PBP2x, and PBP3, while six of the nine penicillin compounds were coselective for PBP2x and PBP3. In contrast, the seven cephalosporin compounds tested display variability in their PBP-binding profiles. Three cephalosporin compounds (cefoxitin, cephalexin, and cefsulodin) and the monobactam aztreonam exhibited selectivity for PBP3, while only cefuroxime (a cephalosporin) was selective for PBP2x. Treatment of S. pneumoniae cultures with a sublethal concentration of cefuroxime that inhibited 60% of PBP2x activity and less than 20% of the activity of other PBPs resulted in formation of elongated cells. In contrast, treatment of S. pneumoniae cultures with concentrations of aztreonam and cefoxitin that inhibited up to 70% of PBP3 activity and less than 30% of other PBPs resulted in no discernible morphological changes. Additionally, correlation of the MIC and IC50s for each PBP, with the exception of faropenem, amdinocillin (mecillinam), and 6-APA, suggests that pneumococcal growth inhibition is primarily due to the inhibition of PBP2x.

Indexed as

AmdinocillinAnti-Bacterial Agentsbeta-LactamsCarbapenemsCephalosporinsDoripenemElectrophoresis, Polyacrylamide GelMeropenemPenicillin-Binding ProteinsStreptococcus pneumoniaeThienamycinsAmdinocillinAnti-Bacterial Agentsbeta-LactamsCarbapenemsCephalosporinsDoripenemfropenemMeropenemPenicillin-Binding ProteinsThienamycins

Identifiers

PMID25845878
PMCPMC4432181
OpenAlexW2121102152

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.