Evidence map›Paper›PMID 25843213›Full record

ArticleJournal of theoretical biology2015

The inflammatory response to influenza A virus (H1N1): An experimental and mathematical study.

Ian Price, Ericka D Mochan-Keef, David Swigon, G Bard Ermentrout, Sarah Lukens, Franklin R Toapanta, Ted M Ross, Gilles Clermont

Abstract read
In one paragraph

Article in Journal of theoretical biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed, 1 pooled it
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 1 synthesis or guideline pooled it, 51 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. CD33 is downregulated by influenza virus H1N1pdm09 and induces ROS and the TNF-α, IL-1β, and IL-6 cytokines in human mononuclear cells.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2022
    Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Ian PriceDepartment of Mathematics, University of Pittsburgh, Pittsburgh, PA, USA.
Ericka D Mochan-KeefDepartment of Computational and Systems Biology, University of Pittsburgh, Pittsburgh, PA, USA.
David SwigonDepartment of Mathematics, University of Pittsburgh, Pittsburgh, PA, USA; Department of Computational and Systems Biology, University of Pittsburgh, Pittsburgh, PA, USA.
G Bard ErmentroutDepartment of Mathematics, University of Pittsburgh, Pittsburgh, PA, USA; Department of Computational and Systems Biology, University of Pittsburgh, Pittsburgh, PA, USA.
Sarah LukensDepartment of Mathematics, University of Pittsburgh, Pittsburgh, PA, USA; Department of Critical Care Medicine, University of Pittsburgh, Pittsburgh, PA, USA.
Franklin R ToapantaCenter for Vaccine Research, University of Pittsburgh, Pittsburgh, PA, USA.
Ted M RossCenter for Vaccine Research, University of Pittsburgh, Pittsburgh, PA, USA.
Gilles ClermontDepartment of Critical Care Medicine, University of Pittsburgh, Pittsburgh, PA, USA. Electronic address: cler@pitt.edu.
University of Pittsburgh · US

Funding

Training, Outreach & Diversity ComponentU54GM088491 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI VAN PANHUIS, WILLEM GIJSBERT · 2009 to 2018
$16.7M
Biological Models of Influenza A VirusR01GM083602 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI CLERMONT, GILLES · 2007 to 2010
$1.5M
Model-Based Decisions in SepsisR01GM105728 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI CLERMONT, GILLES · 2014 to 2017
$1.1M
Predictive Biosignatures for Complicated Novel H1N1 InfluenzaR56AI093930 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI CLERMONT, GILLES, ROSS, TED M · 2012 to 2012
$720k
Spatiotemporal Control of Dynein Function by Num1F32GM093602 · NIGMS · UNIVERSITY OF MASSACHUSETTS AMHERST · PI COLLINS, ELIZABETH SARAH HALPIN · 2011 to 2012
$105k
NIAID NIH HHS R56 AI093930NIAID NIH HHS R56-AI93030NIGMS NIH HHS F32 GM093602NIGMS NIH HHS R01 GM083602NIGMS NIH HHS R01 GM105728NIGMS NIH HHS R01-GM93602NIGMS NIH HHS U54 GM088491NIGMS NIH HHS U54GM088491
6 · The paper itself

Abstract

Mortality from influenza infections continues as a global public health issue, with the host inflammatory response contributing to fatalities related to the primary infection. Based on Ordinary Differential Equation (ODE) formalism, a computational model was developed for the in-host response to influenza A virus, merging inflammatory, innate, adaptive and humoral responses to virus and linking severity of infection, the inflammatory response, and mortality. The model was calibrated using dense cytokine and cell data from adult BALB/c mice infected with the H1N1 influenza strain A/PR/8/34 in sublethal and lethal doses. Uncertainty in model parameters and disease mechanisms was quantified using Bayesian inference and ensemble model methodology that generates probabilistic predictions of survival, defined as viral clearance and recovery of the respiratory epithelium. The ensemble recovers the expected relationship between magnitude of viral exposure and the duration of survival, and suggests mechanisms primarily responsible for survival, which could guide the development of immuno-modulatory interventions as adjuncts to current anti-viral treatments. The model is employed to extrapolate from available data survival curves for the population and their dependence on initial viral aliquot. In addition, the model allows us to illustrate the positive effect of controlled inflammation on influenza survival.

Indexed as

Models, BiologicalAnimalsBayes TheoremComputer SimulationCytokinesFemaleHumansImmunity, InnateInflammationInfluenza A Virus, H1N1 SubtypeInfluenza, HumanMiceMice, Inbred BALB CMonte Carlo MethodOrthomyxoviridae InfectionsProbabilityCytokinesReactive Oxygen SpeciesBayesian inferenceImmune responseInflammationMathematical modelSurvival curve

Identifiers

PMID25843213
PMCPMC4426089
OpenAlexW2064571548

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.