Evidence map›Paper›PMID 25843045›Full record

ArticleStem cell reports2015

Mitochondrial alterations by PARKIN in dopaminergic neurons using PARK2 patient-specific and PARK2 knockout isogenic iPSC lines.

Atossa Shaltouki, Renuka Sivapatham, Ying Pei, Akos A Gerencser, Olga Momčilović, Mahendra S Rao, Xianmin Zeng

Open access · goldAbstract read
In one paragraph

Article in Stem cell reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 86 papers.

0numbers the graph read from it
0cells of the map it votes in
86citing papers in PubMed
10.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

86 citing papers in PubMed, 131 citations in OpenAlex.

  1. Article
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  9. Article
  10. Diverse Functions of Parkin in Midbrain Dopaminergic Neurons.Movement disorders : official journal of the Movement Disorder Society · 2024
    Review
  11. Review
  12. Review
  13. Article
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26 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Atossa ShaltoukiBuck Institute, Novato, CA 94945, USA.
Renuka SivapathamBuck Institute, Novato, CA 94945, USA.
Ying PeiBuck Institute, Novato, CA 94945, USA.
Akos A GerencserBuck Institute, Novato, CA 94945, USA.
Olga MomčilovićBuck Institute, Novato, CA 94945, USA.
Mahendra S RaoNxCell Science, Novato, CA 94947, USA.
Xianmin ZengBuck Institute, Novato, CA 94945, USA; XCell Science, Novato, CA 94947, USA. Electronic address: xzeng@buckinstitute.org.
Buck Institute for Research on Aging · USXCell Science (United States) · US

Funding

Institutional Career Development CoreKL2TR001856 · NCATS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI RAY, KRISTIN N, RUBIO, DORIS M · 2016 to 2025
$13.8M
NCATS NIH HHS KL2 TR001856
6 · The paper itself

Abstract

In this study, we used patient-specific and isogenic PARK2-induced pluripotent stem cells (iPSCs) to show that mutations in PARK2 alter neuronal proliferation. The percentage of TH(+) neurons was decreased in Parkinson's disease (PD) patient-derived neurons carrying various mutations in PARK2 compared with an age-matched control subject. This reduction was accompanied by alterations in mitochondrial:cell volume fraction (mitochondrial volume fraction). The same phenotype was confirmed in isogenic PARK2 null lines. The mitochondrial phenotype was also seen in non-midbrain neurons differentiated from the PARK2 null line, as was the functional phenotype of reduced proliferation in culture. Whole genome expression profiling at various stages of differentiation confirmed the mitochondrial phenotype and identified pathways altered by PARK2 dysfunction that include PD-related genes. Our results are consistent with current model of PARK2 function where damaged mitochondria are targeted for degradation via a PARK2/PINK1-mediated mechanism.

Indexed as

AnimalsBase SequenceCell DifferentiationCells, CulturedDNA, MitochondrialDopaminergic NeuronsHumansImmunohistochemistryInduced Pluripotent Stem CellsKaryotypingMitochondriaMutationParkinson DiseasePhenotypeReal-Time Polymerase Chain ReactionUbiquitin-Protein LigasesDNA, Mitochondrialparkin proteinUbiquitin-Protein Ligases

Identifiers

PMID25843045
PMCPMC4437475
OpenAlexW2018133355

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.