Evidence map›Paper›PMID 25838237›Full record

ArticleJournal of industrial microbiology & biotechnology2015

Growth retardation of Escherichia coli by artificial increase of intracellular ATP.

Yoon-Ah Na, Joo-Young Lee, Weon-Jeong Bang, Hyo Jung Lee, Su-In Choi, Soon-Kyeong Kwon, Kwang-Hwan Jung, Jihyun F Kim, Pil Kim

Open access · bronzeAbstract read
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In one paragraph

Article in Journal of industrial microbiology & biotechnology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 29 citations in OpenAlex.

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  14. Accelerated Growth ofJournal of microbiology and biotechnology · 2020
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  15. Reverse Engineering Targets for Recombinant Protein Production inFrontiers in bioengineering and biotechnology · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Yoon-Ah NaDepartment of Biotechnology, The Catholic University of Korea, Bucheon, 420-743, Gyeonggi, Korea.
Joo-Young Lee
Weon-Jeong Bang
Hyo Jung Lee
Su-In Choi
Soon-Kyeong Kwon
Kwang-Hwan Jung
Jihyun F Kim
Pil Kim
Catholic University of Korea · KRYonsei University · KRSogang University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Overexpression of phosphoenolpyruvate carboxykinase (PCK) was reported to cause the harboring of higher intracellular ATP concentration in Escherichia coli, accompanied with a slower growth rate. For systematic determination of the relationship between the artificial increase of ATP and growth retardation, PCKWT enzyme was directly evolved in vitro and further overexpressed. The evolved PCK67 showed a 60% greater catalytic efficiency than that of PCKWT. Consequently, the PCK67-overexpressing E. coli showed the highest ATP concentration at the log phase of 1.45 μmol/gcell, with the slowest growth rate of 0.66 h(-1), while the PCKWT-overexpressing cells displayed 1.00 μmol/gcell ATP concentration with the growth rate of 0.84 h(-1) and the control had 0.28 μmol/gcell with 1.03 h(-1). To find a plausible reason, PCK-overexpressing cells in a steady state during chemostat growth were applied to monitor intracellular reactive oxygen species (ROS). Higher amount of intracellular ROS were observed as the ATP levels increased. To confirm the hypothesis of slower growth rate without perturbation of the carbon flux by PCK-overexpression, phototrophic Gloeobacter rhodopsin (GR) was expressed. The GR-expressing strain under illumination harbored 81% more ATP concentration along with 82% higher ROS, with a 54% slower maximum growth rate than the control, while both the GR-expressing strain under dark and dicarboxylate transporter (a control membrane protein)-expressing strain showed a lower ATP and increased ROS, and slower growth rate. Regardless of carbon flux changes, the artificial ATP increase was related to the ROS increase and it was reciprocally correlated to the maximum growth rate. To verify that the accumulated intracellular ROS were responsible for the growth retardation, glutathione was added to the medium to reduce the ROS. As a result, the growth retardation was restored by the addition of 0.1 mM glutathione. Anaerobic culture even enabled the artificial ATP-increased E. coli to grow faster than control. Collectively, it was concluded that artificial ATP increases inhibit the growth of E. coli due to the overproduction of ROS.

Indexed as

Adenosine TriphosphateAnaerobiosisBiocatalysisCarbon CycleCyanobacteriaDicarboxylic Acid TransportersEscherichia coliGlutathionePhosphoenolpyruvate CarboxylaseReactive Oxygen SpeciesRhodopsinAdenosine TriphosphateDicarboxylic Acid TransportersGlutathionePhosphoenolpyruvate CarboxylaseReactive Oxygen SpeciesRhodopsin

Identifiers

PMID25838237
OpenAlexW2074903710

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.