Evidence map›Paper›PMID 25837676›Full record

ArticlePloS one2015

Growth of the obligate anaerobe Desulfovibrio vulgaris Hildenborough under continuous low oxygen concentration sparging: impact of the membrane-bound oxygen reductases.

Fanny Ramel, Gael Brasseur, Laetitia Pieulle, Odile Valette, Agnès Hirschler-Réa, Marie Laure Fardeau, Alain Dolla

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.8field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 49 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Recent Advances in Structural Studies of CytochromeInternational journal of molecular sciences · 2022
    Review
  7. Article
  8. Article
  9. Proto-dolomite formation in microbial consortia dominated by Halomonas strains.Extremophiles : life under extreme conditions · 2019
    Article
  10. Article
  11. Article
  12. Article
  13. Sodium butyrate mitigates in vitro ammonia generation in cecal content of laying hens.Environmental science and pollution research international · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Fanny RamelAix-Marseille Université, CNRS, LCB-UMR7283, Marseille, France.
Gael BrasseurAix-Marseille Université, CNRS, LCB-UMR7283, Marseille, France.
Laetitia PieulleAix-Marseille Université, CNRS, LCB-UMR7283, Marseille, France.
Odile ValetteAix-Marseille Université, CNRS, LCB-UMR7283, Marseille, France.
Agnès Hirschler-RéaAix-Marseille Université, Université de Toulon, CNRS, IRD, MIO, UM110, 13288 Marseille, Cedex 09, France.
Marie Laure FardeauAix-Marseille Université, Université de Toulon, CNRS, IRD, MIO, UM110, 13288 Marseille, Cedex 09, France.
Alain DollaAix-Marseille Université, CNRS, LCB-UMR7283, Marseille, France.
Centre National de la Recherche Scientifique · FRAix-Marseille Université · FRInstitut de Recherche pour le Développement · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although obligate anaerobe, the sulfate-reducing bacterium Desulfovibrio vulgaris Hildenborough (DvH) exhibits high aerotolerance that involves several enzymatic systems, including two membrane-bound oxygen reductases, a bd-quinol oxidase and a cc(b/o)o3 cytochrome oxidase. Effect of constant low oxygen concentration on growth and morphology of the wild-type, single (Δbd, Δcox) and double deletion (Δcoxbd) mutant strains of the genes encoding these oxygen reductases was studied. When both wild-type and deletion mutant strains were cultured in lactate/sulfate medium under constant 0.02% O2 sparging, they were able to grow but the final biomasses and the growth yield were lower than that obtained under anaerobic conditions. At the end of the growth, lactate was not completely consumed and when conditions were then switched to anaerobic, growth resumed. Time-lapse microscopy revealed that a large majority of the cells were then able to divide (over 97%) but the time to recover a complete division event was longer for single deletion mutant Δbd than for the three other strains. Determination of the molar growth yields on lactate suggested that a part of the energy gained from lactate oxidation was derived toward cells protection/repairing against oxidative conditions rather than biosynthesis, and that this part was higher in the single deletion mutant Δbd and, to a lesser extent, Δcox strains. Our data show that when DvH encounters oxidative conditions, it is able to stop growing and to rapidly resume growing when conditions are switched to anaerobic, suggesting that it enters active dormancy sate under oxidative conditions. We propose that the pyruvate-ferredoxin oxidoreductase (PFOR) plays a central role in this phenomenon by reversibly switching from an oxidative-sensitive fully active state to an oxidative-insensitive inactive state. The oxygen reductases, and especially the bd-quinol oxidase, would have a crucial function by maintaining reducing conditions that permit PFOR to stay in its active state.

Indexed as

AnaerobiosisBiomassCell ProliferationDesulfovibrio vulgarisElectron Transport Complex IVLactic AcidOxidation-ReductionOxidoreductasesOxygenPyruvate Synthasecytochrome o oxidaseduroquinol oxidaseElectron Transport Complex IVLactic AcidOxidoreductasesOxygenPyruvate Synthase

Identifiers

PMID25837676
PMCPMC4383621
OpenAlexW1997246468

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.