Evidence map›Paper›PMID 25837623›Full record

ArticlePLoS biology2015

Regulation of protein quality control by UBE4B and LSD1 through p53-mediated transcription.

Goran Periz, Jiayin Lu, Tao Zhang, Mark W Kankel, Angela M Jablonski, Robert Kalb, Alexander McCampbell, Jiou Wang

Open access · goldAbstract read
In one paragraph

Article in PLoS biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 52 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. The SWIB/MDM2 motif of UBE4B activates the p53 pathway.Molecular therapy. Nucleic acids · 2023
    Article
  5. Review
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  7. Review
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  10. USP7 regulates ALS-associated proteotoxicity and quality control through the NEDD4L-SMAD pathway.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
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  14. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Goran PerizDepartment of Biochemistry and Molecular Biology and Department of Neuroscience, Bloomberg School of Public Health and School of Medicine, Johns Hopkins University, Baltimore, Maryland, United States of America.
Jiayin LuDepartment of Biochemistry and Molecular Biology and Department of Neuroscience, Bloomberg School of Public Health and School of Medicine, Johns Hopkins University, Baltimore, Maryland, United States of America.
Tao ZhangDepartment of Biochemistry and Molecular Biology and Department of Neuroscience, Bloomberg School of Public Health and School of Medicine, Johns Hopkins University, Baltimore, Maryland, United States of America.
Mark W KankelBiogen Idec, Cambridge, Massachusetts, United States of America.
Angela M JablonskiDepartment of Neuroscience, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America.
Robert KalbDepartment of Neurology and Pediatrics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America.
Alexander McCampbellBiogen Idec, Cambridge, Massachusetts, United States of America.
Jiou WangDepartment of Biochemistry and Molecular Biology and Department of Neuroscience, Bloomberg School of Public Health and School of Medicine, Johns Hopkins University, Baltimore, Maryland, United States of America.
Johns Hopkins University · USBiogen (United States) · USUniversity of Pennsylvania · US

Funding

Neurodegeneration and Proteotoxicity Dissected in C. elegans and MammalsR01NS074324 · NINDS · JOHNS HOPKINS UNIVERSITY · PI WANG, JIOU · 2011 to 2025
$6.2M
Mechanism of SOD1-linked ALS studied in C elegans and mouse modelsR00NS062089 · NINDS · JOHNS HOPKINS UNIVERSITY · PI WANG, JIOU · 2010 to 2012
$737k
Mechanism of SOD1-linked ALS studied in C elegans and mouse modelsK99NS062089 · NINDS · YALE UNIVERSITY · PI WANG, JIOU · 2008 to 2009
$180k
NINDS NIH HHS K99 NS062089NINDS NIH HHS NS062089NINDS NIH HHS NS074324NINDS NIH HHS R00 NS062089NINDS NIH HHS R01 NS074324
6 · The paper itself

Abstract

Protein quality control is essential for clearing misfolded and aggregated proteins from the cell, and its failure is associated with many neurodegenerative disorders. Here, we identify two genes, ufd-2 and spr-5, that when inactivated, synergistically and robustly suppress neurotoxicity associated with misfolded proteins in Caenorhabditis elegans. Loss of human orthologs ubiquitination factor E4 B (UBE4B) and lysine-specific demethylase 1 (LSD1), respectively encoding a ubiquitin ligase and a lysine-specific demethylase, promotes the clearance of misfolded proteins in mammalian cells by activating both proteasomal and autophagic degradation machineries. An unbiased search in this pathway reveals a downstream effector as the transcription factor p53, a shared substrate of UBE4B and LSD1 that functions as a key regulator of protein quality control to protect against proteotoxicity. These studies identify a new protein quality control pathway via regulation of transcription factors and point to the augmentation of protein quality control as a wide-spectrum antiproteotoxicity strategy.

Indexed as

Quality ControlAnimalsAutophagyCaenorhabditis elegansCaenorhabditis elegans ProteinsGene Knockdown TechniquesMutationProteasome Endopeptidase ComplexStress, PhysiologicalSuperoxide DismutaseSuperoxide Dismutase-1Transcription, GeneticTumor Suppressor Protein p53Caenorhabditis elegans ProteinsProteasome Endopeptidase ComplexSOD1 protein, humanSuperoxide DismutaseSuperoxide Dismutase-1Tumor Suppressor Protein p53

Identifiers

PMID25837623
PMCPMC4383508
OpenAlexW2040315040

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.