Evidence map›Paper›PMID 25836330›Full record

ArticlePLoS pathogens2015

TGF-β suppression of HBV RNA through AID-dependent recruitment of an RNA exosome complex.

Guoxin Liang, Guangyan Liu, Kouichi Kitamura, Zhe Wang, Sajeda Chowdhury, Ahasan Md Monjurul, Kousho Wakae, Miki Koura, Miyuki Shimadu, Kazuo Kinoshita and 1 more

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 48 citations in OpenAlex.

  1. Article
  2. Article
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  5. Article
  6. Article
  7. Urokinase plasminogen activator surface receptor restricts HIV-1 replication by blocking virion release from the cell membrane.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  8. Signaling Induced by Chronic Viral Hepatitis: Dependence and Consequences.International journal of molecular sciences · 2022
    Review
  9. Article
  10. Review
  11. Review
  12. Article
  13. Review
  14. Article
  15. Review
  16. Review
  17. Article
  18. Article
  19. Article
  20. Correlation of APOBEC3G Polymorphism with Human Papillomavirus (HPV) Persistent Infection and Progression of Cervical Lesions.Medical science monitor : international medical journal of experimental and clinical research · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 3 countries.

Guoxin LiangDepartment of Molecular Genetics, Kanazawa University Graduate School of Medical Science, Kanazawa, Japan; Department of Microbiology and Immunology, Columbia University, New York, New York, United States of America.
Guangyan LiuDepartment of Molecular Genetics, Kanazawa University Graduate School of Medical Science, Kanazawa, Japan.
Kouichi KitamuraDepartment of Molecular Genetics, Kanazawa University Graduate School of Medical Science, Kanazawa, Japan.
Zhe WangDepartment of Molecular Genetics, Kanazawa University Graduate School of Medical Science, Kanazawa, Japan; Division of Medical Oncology, Affiliated Zhongshan Hospital of Dalian University, Dalian, China.
Sajeda ChowdhuryDepartment of Molecular Genetics, Kanazawa University Graduate School of Medical Science, Kanazawa, Japan.
Ahasan Md MonjurulDepartment of Molecular Genetics, Kanazawa University Graduate School of Medical Science, Kanazawa, Japan.
Kousho WakaeDepartment of Molecular Genetics, Kanazawa University Graduate School of Medical Science, Kanazawa, Japan.
Miki KouraDepartment of Molecular Genetics, Kanazawa University Graduate School of Medical Science, Kanazawa, Japan.
Miyuki ShimaduDepartment of Molecular Genetics, Kanazawa University Graduate School of Medical Science, Kanazawa, Japan.
Kazuo KinoshitaEvolutionary Medicine, Shiga Medical Center Research Institute, Moriyama, Japan.
Masamichi MuramatsuDepartment of Molecular Genetics, Kanazawa University Graduate School of Medical Science, Kanazawa, Japan.
Kanazawa University · JPShiga Medical Center · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transforming growth factor (TGF)-β inhibits hepatitis B virus (HBV) replication although the intracellular effectors involved are not determined. Here, we report that reduction of HBV transcripts by TGF-β is dependent on AID expression, which significantly decreases both HBV transcripts and viral DNA, resulting in inhibition of viral replication. Immunoprecipitation reveals that AID physically associates with viral P protein that binds to specific virus RNA sequence called epsilon. AID also binds to an RNA degradation complex (RNA exosome proteins), indicating that AID, RNA exosome, and P protein form an RNP complex. Suppression of HBV transcripts by TGF-β was abrogated by depletion of either AID or RNA exosome components, suggesting that AID and the RNA exosome involve in TGF-β mediated suppression of HBV RNA. Moreover, AID-mediated HBV reduction does not occur when P protein is disrupted or when viral transcription is inhibited. These results suggest that induced expression of AID by TGF-β causes recruitment of the RNA exosome to viral RNP complex and the RNA exosome degrades HBV RNA in a transcription-coupled manner.

Indexed as

AICDA (Activation-Induced Cytidine Deaminase)APOBEC DeaminasesBlotting, WesternCell LineCytidine DeaminaseCytosine DeaminaseExosome Multienzyme Ribonuclease ComplexHepatitis BHepatitis B virusHumansImmunoprecipitationPolymerase Chain ReactionRNA, ViralTransfectionTransforming Growth Factor betaVirus ReplicationAICDA (Activation-Induced Cytidine Deaminase)APOBEC3 proteins, humanAPOBEC DeaminasesCytidine DeaminaseCytosine DeaminaseExosome Multienzyme Ribonuclease ComplexRNA, ViralTransforming Growth Factor beta

Identifiers

PMID25836330
PMCPMC4383551
OpenAlexW1979333281

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.