Evidence map›Paper›PMID 25833946›Full record

ArticleThe Journal of biological chemistry2015

Binding of Substrates to the Central Pore of the Vps4 ATPase Is Autoinhibited by the Microtubule Interacting and Trafficking (MIT) Domain and Activated by MIT Interacting Motifs (MIMs).

Han Han, Nicole Monroe, Jörg Votteler, Binita Shakya, Wesley I Sundquist, Christopher P Hill

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed.

  1. Article
  2. ESCRT-III function in membrane fission and repair.Nature reviews. Molecular cell biology · 2026
    Review
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  12. An ensemble of cryo-EM structures of TRiC reveal its conformational landscape and subunit specificity.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
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  14. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Han HanFrom the Department of Biochemistry, University of Utah School of Medicine, Salt Lake City, Utah 84112-5650.
Nicole MonroeFrom the Department of Biochemistry, University of Utah School of Medicine, Salt Lake City, Utah 84112-5650.
Jörg VottelerFrom the Department of Biochemistry, University of Utah School of Medicine, Salt Lake City, Utah 84112-5650.
Binita ShakyaFrom the Department of Biochemistry, University of Utah School of Medicine, Salt Lake City, Utah 84112-5650.
Wesley I SundquistFrom the Department of Biochemistry, University of Utah School of Medicine, Salt Lake City, Utah 84112-5650 wes@biochem.utah.edu.
Christopher P HillFrom the Department of Biochemistry, University of Utah School of Medicine, Salt Lake City, Utah 84112-5650 chris@biochem.utah.edu.

Funding

UTAH REGIONAL CANCER CENTERP30CA042014 · NCI · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI Jared P Rutter · 1986 to 2026
$72.6M
X-ray Cryst. CoreP50GM082545 · NIGMS · UNIVERSITY OF UTAH · PI SUNDQUIST, WESLEY I. · 2007 to 2018
$51.1M
Biochemistry of HIV-1 Membrane Recognition and BuddingR01AI051174 · NIAID · UNIVERSITY OF UTAH · PI SUNDQUIST, WESLEY I. · 2002 to 2016
$7.2M
Training Program in Microbial PathogenesisT32AI055434 · NIAID · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI MULVEY, MATTHEW A, PLANELLES, VICENTE · 2004 to 2025
$6.0M
ESCRT-III and MIT Protein Complexes in CytokinesisR01GM112080 · NIGMS · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI CHRISTOPHER P. HILL, WESLEY I. SUNDQUIST · 2014 to 2026
$4.1M
NCI NIH HHS P30 CA042014NCI NIH HHS P30CA042014NIAID NIH HHS R01 AI051174NIAID NIH HHS T32 AI055434NIGMS NIH HHS P50 GM082545NIGMS NIH HHS R01 GM112080
6 · The paper itself

Abstract

The endosomal sorting complexes required for transport (ESCRT) pathway drives reverse topology membrane fission events within multiple cellular pathways, including cytokinesis, multivesicular body biogenesis, repair of the plasma membrane, nuclear membrane vesicle formation, and HIV budding. The AAA ATPase Vps4 is recruited to membrane necks shortly before fission, where it catalyzes disassembly of the ESCRT-III lattice. The N-terminal Vps4 microtubule-interacting and trafficking (MIT) domains initially bind the C-terminal MIT-interacting motifs (MIMs) of ESCRT-III subunits, but it is unclear how the enzyme then remodels these substrates in response to ATP hydrolysis. Here, we report quantitative binding studies that demonstrate that residues from helix 5 of the Vps2p subunit of ESCRT-III bind to the central pore of an asymmetric Vps4p hexamer in a manner that is dependent upon the presence of flexible nucleotide analogs that can mimic multiple states in the ATP hydrolysis cycle. We also find that substrate engagement is autoinhibited by the Vps4p MIT domain and that this inhibition is relieved by binding of either Type 1 or Type 2 MIM elements, which bind the Vps4p MIT domain through different interfaces. These observations support the model that Vps4 substrates are initially recruited by an MIM-MIT interaction that activates the Vps4 central pore to engage substrates and generate force, thereby triggering ESCRT-III disassembly.

Indexed as

Gene Expression Regulation, EnzymologicGene Expression Regulation, FungalAdenosine TriphosphatasesAdenosine TriphosphateAmino Acid MotifsAmino Acid SequenceCrystallography, X-RayEndosomal Sorting Complexes Required for TransportEndosomesFluorescence PolarizationHydrolysisMicrotubulesModels, MolecularMolecular Sequence DataProtein BindingProtein Structure, SecondaryAdenosine TriphosphatasesAdenosine TriphosphateDID4 protein, S cerevisiaeEndosomal Sorting Complexes Required for TransportSaccharomyces cerevisiae ProteinsVPS4 protein, S cerevisiaeATPases associated with diverse cellular activities (AAA)endosomal sorting complexes required for transport (ESCRT)enzyme mechanismfluorescence anisotropyprotein-protein interaction

Identifiers

PMID25833946
PMCPMC4505595

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.