Evidence map›Paper›PMID 25831954›Full record

ArticleVirulence2015

Characterization of an α-l-fucosidase from the periodontal pathogen Tannerella forsythia.

Z A Megson, A Koerdt, H Schuster, R Ludwig, B Janesch, A Frey, K Naylor, I B H Wilson, G P Stafford, P Messner and 1 more

Open access · goldAbstract read
In one paragraph

Article in Virulence, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
3.0field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 39 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. A Robust α-l-Fucosidase fromACS chemical biology · 2024
    Article
  5. Article
  6. Article
  7. Identification and Characterization of a Novel α-L-Fucosidase fromInternational journal of molecular sciences · 2023
    Article
  8. Review
  9. Article
  10. Article
  11. The dental plaque biofilm matrix.Periodontology 2000 · 2021
    Review
  12. Fucosidases from the human gut symbiont Ruminococcus gnavus.Cellular and molecular life sciences : CMLS · 2021
    Article
  13. Article
  14. Review
  15. Article
  16. Emerging facets of prokaryotic glycosylation.FEMS microbiology reviews · 2017
    Review
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Z A Megsona Department of NanoBiotechnology; NanoGlycobiology unit; Universität für Bodenkultur Wien ; Vienna , Austria.
A Koerdt
H Schuster
R Ludwig
B Janesch
A Frey
K Naylor
I B H Wilson
G P Stafford
P Messner
C Schäffer
BOKU University · ATUniversity of Sheffield · GB

Funding

Austrian Science Fund FWF M 1492Austrian Science Fund FWF W 1224
6 · The paper itself

Abstract

The periodontal pathogen Tannerella forsythia expresses several glycosidases which are linked to specific growth requirements and are involved in the invasion of host tissues. α-l-Fucosyl residues are exposed on various host glycoconjugates and, thus, the α-l-fucosidases predicted in the T. forsythia ATCC 43037 genome could potentially serve roles in host-pathogen interactions. We describe the molecular cloning and characterization of the putative fucosidase TfFuc1 (encoded by the bfo_2737 = Tffuc1 gene), previously reported to be present in an outer membrane preparation. In terms of sequence, this 51-kDa protein is a member of the glycosyl hydrolase family GH29. Using an artificial substrate, p-nitrophenyl-α-fucose (KM 670 μM), the enzyme was determined to have a pH optimum of 9.0 and to be competitively inhibited by fucose and deoxyfuconojirimycin. TfFuc1 was shown here to be a unique α(1,2)-fucosidase that also possesses α(1,6) specificity on small unbranched substrates. It is active on mucin after sialidase-catalyzed removal of terminal sialic acid residues and also removes fucose from blood group H. Following knock-out of the Tffuc1 gene and analyzing biofilm formation and cell invasion/adhesion of the mutant in comparison to the wild-type, it is most likely that the enzyme does not act extracellularly. Biochemically interesting as the first fucosidase in T. forsythia to be characterized, the biological role of TfFuc1 may well be in the metabolism of short oligosaccharides in the periplasm, thereby indirectly contributing to the virulence of this organism. TfFuc1 is the first glycosyl hydrolase in the GH29 family reported to be a specific α(1,2)-fucosidase.

Indexed as

alpha-L-FucosidaseAnimalsBacteroidetesCloning, MolecularFucoseHost-Pathogen InteractionsKineticsMucinsOligosaccharidesPeriodontitisSubstrate Specificityalpha-L-FucosidaseFucoseMucinsOligosaccharides2) fucosidase4-nitrophenyl-α-l-fucopyranosideAmp, ampicillinBHI, brain heart infusion mediumCBB, Coomassie brilliant blue G 250DFJ, deoxyfuconojirimycinenzyme activityenzyme specificityErm, erythromycinFDH, fucose dehydrogenaseHPAEC, high-performance anion-exchange chromatography with pulsed amperometric detectionLC-ESI-MS, liquid chromatography-electrospray ionisation-mass spectrometryNAM, N-acetylmuramic acidoral pathogenPBS, phosphate-buffered salineperiodontitispNP-fucoserTfFuc-1, recombinant TfFuc1 enzymeSDS-PAGE, sodium dodecylsulphate polyacrylamide gel electrophoresistannerella forsythiaTfFuc1, T. forsythia ATCC 43037 fucosidase-1 encoded by the bfo_2737 gene, equally Tffuc1T. forsythia, Tannerella forsythia ATCC 43037WT, wild-type bacterium.α(1

Identifiers

PMID25831954
PMCPMC4413431
OpenAlexW1875600518

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.