Evidence map›Paper›PMID 25831023›Full record

ArticleTranscription2015

Friedreich's ataxia--a case of aberrant transcription termination?

Jill Sergesketter Butler, Marek Napierala

Open access · hybridAbstract read
In one paragraph

Article in Transcription, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.3field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 26 citations in OpenAlex.

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  12. Modeling simple repeat expansion diseases with iPSC technology.Cellular and molecular life sciences : CMLS · 2016
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 3 countries.

Jill Sergesketter Butlera University of Alabama at Birmingham; Department of Biochemistry and Molecular Genetics ; UAB Stem Cell Institute ; Birmingham , AL USA.
Marek Napierala
Stem Cell Institute · PA

Funding

GAA REPEATS INDUCED EPIGENETIC SILENCING IN FRIEDREICH'S ATAXIAR01NS081366 · NINDS · UT SOUTHWESTERN MEDICAL CENTER · PI NAPIERALA, MAREK · 2012 to 2021
$3.7M
NINDS NIH HHS 7R01NS081366NINDS NIH HHS R01 NS081366
6 · The paper itself

Abstract

Reduced expression of the mitochondrial protein Frataxin (FXN) is the underlying cause of Friedreich's ataxia. We propose a model of premature termination of FXN transcription induced by pathogenic expanded GAA repeats that links R-loop structures, antisense transcription, and heterochromatin formation as a novel mechanism of transcriptional repression in Friedreich's ataxia.

Indexed as

Transcription Termination, GeneticFrataxinFriedreich AtaxiaGene Expression RegulationHeterochromatinHumansIron-Binding ProteinsMitochondriaTrinucleotide Repeat ExpansionFrataxinHeterochromatinIron-Binding Proteinsantisense transcriptiondsRNA, double-stranded RNAFRDA, Friedreich's ataxiaFriedreich's ataxiaFXN, FrataxinGAA repeatsH3K9me2/me3, histone H3 lysine 9 methylationPAS, polyadenylation signalrepeat expansion diseasesR-loopsRNAP II, RNA polymerase IItranscription terminationUTRs, untranslated regions

Identifiers

PMID25831023
PMCPMC4581357
OpenAlexW1552176566

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.