Evidence map›Paper›PMID 25830415›Full record

ArticleCell cycle (Georgetown, Tex.)2015

Tctex1d2 associates with short-rib polydactyly syndrome proteins and is required for ciliogenesis.

Ankur A Gholkar, Silvia Senese, Yu-Chen Lo, Joseph Capri, William J Deardorff, Harish Dharmarajan, Ely Contreras, Emmanuelle Hodara, Julian P Whitelegge, Peter K Jackson and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Cell cycle (Georgetown, Tex.), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 49 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Review
  6. Review
  7. Article
  8. Article
  9. Intraflagellar transport trains and motors: Insights from structure.Seminars in cell & developmental biology · 2020
    Review
  10. Dental Anomalies in Rare, Genetic Ciliopathic Disorder-A Case Report and Review of Literature.International journal of environmental research and public health · 2020
    Review
  11. Article
  12. Article
  13. Dissecting the mechanisms of cell division.The Journal of biological chemistry · 2019
    Review
  14. Review
  15. Article
  16. Article
  17. Genes and molecular pathways underpinning ciliopathies.Nature reviews. Molecular cell biology · 2017
    Review
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 3 countries.

Ankur A Gholkara Department of Chemistry and Biochemistry ; University of California ; Los Angeles , CA USA.
Silvia Senese
Yu-Chen Lo
Joseph Capri
William J Deardorff
Harish Dharmarajan
Ely Contreras
Emmanuelle Hodara
Julian P Whitelegge
Peter K Jackson
Jorge Z Torres
University of California System · USIONICS Mass Spectrometry (Canada) · CAUniversity of California, Los Angeles · USStanford University · US

Funding

Transgenic & Knock-out MouseP30DK063491 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI MILES Frome WILKINSON · 2003 to 2026
$40.4M
UCLA MSD ProgramR25GM055052 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI BARBER, PAUL HENRY, HASSON, TAMA W. · 1996 to 2021
$9.2M
NIDDK NIH HHS P30 DK063491
6 · The paper itself

Abstract

Short-rib polydactyly syndromes (SRPS) arise from mutations in genes involved in retrograde intraflagellar transport (IFT) and basal body homeostasis, which are critical for cilia assembly and function. Recently, mutations in WDR34 or WDR60 (candidate dynein intermediate chains) were identified in SRPS. We have identified and characterized Tctex1d2, which associates with Wdr34, Wdr60 and other dynein complex 1 and 2 subunits. Tctex1d2 and Wdr60 localize to the base of the cilium and their depletion causes defects in ciliogenesis. We propose that Tctex1d2 is a novel dynein light chain important for trafficking to the cilium and potentially retrograde IFT and is a new molecular link to understanding SRPS pathology.

Indexed as

Adaptor Proteins, Signal TransducingCarrier ProteinsCiliaCytoskeletal ProteinsDyneinsHEK293 CellsHeLa CellsHumansMicrotubule-Organizing CenterMutationProtein TransportShort Rib-Polydactyly SyndromeAdaptor Proteins, Signal TransducingCarrier ProteinsCytoskeletal ProteinsDYNC2I1 protein, humanDyneinsDYNLT2B protein, humanWDR34 protein, humanCiliaciliogenesisdyneinTctex1d2Wdr60

Identifiers

PMID25830415
PMCPMC4614626
OpenAlexW2050118064

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.