Evidence map›Paper›PMID 25826358›Full record

ArticleFuture medicinal chemistry2015

Novel scaffolds for modulation of TRPV1 identified with pharmacophore modeling and virtual screening.

Daria Goldmann, Peter Pakfeifer, Steffen Hering, Gerhard F Ecker

Open access · hybridAbstract read
In one paragraph

Article in Future medicinal chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.2field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Anticancer Activity of Region B Capsaicin Analogs.Journal of medicinal chemistry · 2023
    Review
  4. Review
  5. Article
  6. Article
  7. Empowering pharmacoinformatics by linked life science data.Journal of computer-aided molecular design · 2017
    Article
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Daria GoldmannUniversity of Vienna, Department of Pharmaceutical Chemistry, Althanstrasse 14, 1090 Vienna, Austria.
Peter Pakfeifer
Steffen Hering
Gerhard F Ecker
University of Vienna · AT

Funding

Austrian Science Fund FWF W 1232
6 · The paper itself

Abstract

aimThe transient receptor potential vanilloid type 1 (TRPV1) is responsible for pain perception in the peripheral nervous system (PNS). TRPV1 is thus considered a versatile target for development of non-opioid analgesics.

resultsPharmacophore-based clustering of a publicly available data set of TRPV1 antagonists revealed a set of models, which were validated with data sets of inactive compounds, decoys and known drug candidates. The top ranked pharmacophore models were subsequently used for virtual screening. Based on a unique in-house protocol, a set of compounds was selected and biologically tested for modulation of TRPV1 in a voltage-clamp model.

conclusionPharmacophore models extracted from large public data sets are a valuable source for identification of novel scaffolds for TRPV1 receptor modulation.

Indexed as

AlgorithmsAnalgesics, Non-NarcoticDrug Evaluation, PreclinicalHumansLigandsModels, MolecularPeripheral Nervous SystemTRPV Cation ChannelsAnalgesics, Non-NarcoticLigandsTRPV1 protein, humanTRPV Cation Channels

Identifiers

PMID25826358
PMCPMC6422283
OpenAlexW2125957153

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.