Evidence map›Paper›PMID 25825909›Full record

ArticlePloS one2015

Breaking the hydrophobicity of the MscL pore: insights into a charge-induced gating mechanism.

Balasubramanian Chandramouli, Danilo Di Maio, Giordano Mancini, Vincenzo Barone, Giuseppe Brancato

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Balasubramanian ChandramouliScuola Normale Superiore, Piazza dei Cavalieri 7, I-56126, Pisa, Italy.
Danilo Di MaioScuola Normale Superiore, Piazza dei Cavalieri 7, I-56126, Pisa, Italy; Istituto Nazionale di Fisica Nucleare (INFN), sezione di Pisa, Largo Bruno Pontecorvo 3, 56127, Pisa, Italy.
Giordano ManciniScuola Normale Superiore, Piazza dei Cavalieri 7, I-56126, Pisa, Italy; Istituto Nazionale di Fisica Nucleare (INFN), sezione di Pisa, Largo Bruno Pontecorvo 3, 56127, Pisa, Italy.
Vincenzo BaroneScuola Normale Superiore, Piazza dei Cavalieri 7, I-56126, Pisa, Italy; Istituto Nazionale di Fisica Nucleare (INFN), sezione di Pisa, Largo Bruno Pontecorvo 3, 56127, Pisa, Italy.
Giuseppe BrancatoScuola Normale Superiore, Piazza dei Cavalieri 7, I-56126, Pisa, Italy; Istituto Nazionale di Fisica Nucleare (INFN), sezione di Pisa, Largo Bruno Pontecorvo 3, 56127, Pisa, Italy.
Istituto Nazionale di Fisica Nucleare, Sezione di Pisa · ITScuola Normale Superiore · IT

Funding

European Research Council 320951
6 · The paper itself

Abstract

The mechanosensitive channel of large conductance (MscL) is a protein that responds to membrane tension by opening a transient pore during osmotic downshock. Due to its large pore size and functional reconstitution into lipid membranes, MscL has been proposed as a promising artificial nanovalve suitable for biotechnological applications. For example, site-specific mutations and tailored chemical modifications have shown how MscL channel gating can be triggered in the absence of tension by introducing charged residues at the hydrophobic pore level. Recently, engineered MscL proteins responsive to stimuli like pH or light have been reported. Inspired by experiments, we present a thorough computational study aiming at describing, with atomistic detail, the artificial gating mechanism and the molecular transport properties of a light-actuated bacterial MscL channel, in which a charge-induced gating mechanism has been enabled through the selective cleavage of photo-sensitive alkylating agents. Properties such as structural transitions, pore dimension, ion flux and selectivity have been carefully analyzed. Besides, the effects of charge on alternative sites of the channel with respect to those already reported have been addressed. Overall, our results provide useful molecular insights into the structural events accompanying the engineered MscL channel gating and the interplay of electrostatic effects, channel opening and permeation properties. In addition, we describe how the experimentally observed ionic current in a single-subunit charged MscL mutant is obtained through a hydrophobicity breaking mechanism involving an asymmetric inter-subunit motion.

Indexed as

Ion Channel GatingEscherichia coli ProteinsHydrophobic and Hydrophilic InteractionsIon ChannelsModels, MolecularProtein ConformationEscherichia coli ProteinsIon ChannelsMscL protein, E coli

Identifiers

PMID25825909
PMCPMC4380313
OpenAlexW2083530720

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.