Evidence map›Paper›PMID 25825526›Full record

ArticleMolecular & cellular proteomics : MCP2015

RNA Interference Screen to Identify Kinases That Suppress Rescue of ΔF508-CFTR.

Agata M Trzcińska-Daneluti, Anthony Chen, Leo Nguyen, Ryan Murchie, Chong Jiang, Jason Moffat, Lawrence Pelletier, Daniela Rotin

Open access · hybridAbstract read
In one paragraph

Article in Molecular & cellular proteomics : MCP, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 1 pooled it
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 1 synthesis or guideline pooled it, 31 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Targeting the EGFR-ERK axis using the compatible solute ectoine to stabilize CFTR mutant F508del.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2022
    Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Human pantothenate kinase 4 is a pseudo-pantothenate kinase.Protein science : a publication of the Protein Society · 2019
    Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Hallmarks of therapeutic management of the cystic fibrosis functional landscape.Journal of cystic fibrosis : official journal of the European Cystic Fibrosis Society · 2015
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Agata M Trzcińska-DanelutiFrom the ‡Program in Cell Biology, The Hospital for Sick Children, Toronto, and Biochemistry Department, University of Toronto; PGCRL, 19-9715, 686 Bay St., Toronto, Ont., Canada, M5G 0A4.
Anthony ChenFrom the ‡Program in Cell Biology, The Hospital for Sick Children, Toronto, and Biochemistry Department, University of Toronto; PGCRL, 19-9715, 686 Bay St., Toronto, Ont., Canada, M5G 0A4.
Leo NguyenFrom the ‡Program in Cell Biology, The Hospital for Sick Children, Toronto, and Biochemistry Department, University of Toronto; PGCRL, 19-9715, 686 Bay St., Toronto, Ont., Canada, M5G 0A4.
Ryan MurchieFrom the ‡Program in Cell Biology, The Hospital for Sick Children, Toronto, and Biochemistry Department, University of Toronto; PGCRL, 19-9715, 686 Bay St., Toronto, Ont., Canada, M5G 0A4.
Chong JiangFrom the ‡Program in Cell Biology, The Hospital for Sick Children, Toronto, and Biochemistry Department, University of Toronto; PGCRL, 19-9715, 686 Bay St., Toronto, Ont., Canada, M5G 0A4.
Jason Moffat§CCBR, University of Toronto;
Lawrence Pelletier¶The Samuel Lunenfeld Research Institute, University of Toronto.
Daniela RotinFrom the ‡Program in Cell Biology, The Hospital for Sick Children, Toronto, and Biochemistry Department, University of Toronto; PGCRL, 19-9715, 686 Bay St., Toronto, Ont., Canada, M5G 0A4 drotin@sickkids.ca.
University of Toronto · CASickKids Foundation · CAHospital for Sick Children · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cystic Fibrosis (CF) is an autosomal recessive disorder caused by mutations in the gene encoding the Cystic fibrosis transmembrane conductance regulator (CFTR). ΔF508-CFTR, the most common disease-causing CF mutant, exhibits folding and trafficking defects and is retained in the endoplasmic reticulum, where it is targeted for proteasomal degradation. To identify signaling pathways involved in ΔF508-CFTR rescue, we screened a library of endoribonuclease-prepared short interfering RNAs (esiRNAs) that target ∼750 different kinases and associated signaling proteins. We identified 20 novel suppressors of ΔF508-CFTR maturation, including the FGFR1. These were subsequently validated by measuring channel activity by the YFP halide-sensitive assay following shRNA-mediated knockdown, immunoblotting for the mature (band C) ΔF508-CFTR and measuring the amount of surface ΔF508-CFTR by ELISA. The role of FGFR signaling on ΔF508-CFTR trafficking was further elucidated by knocking down FGFRs and their downstream signaling proteins: Erk1/2, Akt, PLCγ-1, and FRS2. Interestingly, inhibition of FGFR1 with SU5402 administered to intestinal organoids (mini-guts) generated from the ileum of ΔF508-CFTR homozygous mice resulted in a robust ΔF508-CFTR rescue. Moreover, combination of SU5402 and VX-809 treatments in cells led to an additive enhancement of ΔF508-CFTR rescue, suggesting these compounds operate by different mechanisms. Chaperone array analysis on human bronchial epithelial cells harvested from ΔF508/ΔF508-CFTR transplant patients treated with SU5402 identified altered expression of several chaperones, an effect validated by their overexpression or knockdown experiments. We propose that FGFR signaling regulates specific chaperones that control ΔF508-CFTR maturation, and suggest that FGFRs may serve as important targets for therapeutic intervention for the treatment of CF.

Indexed as

AnimalsCell LineCystic Fibrosis Transmembrane Conductance RegulatorDogsHumansIntestinal MucosaMadin Darby Canine Kidney CellsMaleMice, TransgenicOrganoidsProtein KinasesRNA InterferenceCystic Fibrosis Transmembrane Conductance Regulatorcystic fibrosis transmembrane conductance regulator delta F508Protein Kinases

Identifiers

PMID25825526
PMCPMC4458721
OpenAlexW2108205165

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.