Evidence map›Paper›PMID 25825169›Full record

ArticleThe Journal of general physiology2015

Cysteine accessibility probes timing and extent of NBD separation along the dimer interface in gating CFTR channels.

Luiz A Poletto Chaves, David C Gadsby

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of general physiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
4.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
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  4. Article
  5. Review
  6. Article
  7. Structural mechanisms of CFTR function and dysfunction.The Journal of general physiology · 2018
    Review
  8. Review
  9. A common mechanism for CFTR potentiators.The Journal of general physiology · 2017
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. New structural insights into the gating movements of CFTR.The Journal of general physiology · 2015
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Luiz A Poletto ChavesThe Laboratory of Cardiac/Membrane Physiology, The Rockefeller University, New York, NY 10065.
David C GadsbyThe Laboratory of Cardiac/Membrane Physiology, The Rockefeller University, New York, NY 10065 gadsby@rockefeller.edu.
Rockefeller University · US

Funding

MECHANISMS, STRUCTURE, AND REGULATION OF CFTR'S NBFSR01DK051767 · NIDDK · ROCKEFELLER UNIVERSITY · PI GADSBY, DAVID C · 1996 to 2014
$4.9M
NIDDK NIH HHS DK51767NIDDK NIH HHS R01 DK051767
6 · The paper itself

Abstract

Cystic fibrosis transmembrane conductance regulator (CFTR) channel opening and closing are driven by cycles of adenosine triphosphate (ATP) binding-induced formation and hydrolysis-triggered disruption of a heterodimer of its cytoplasmic nucleotide-binding domains (NBDs). Although both composite sites enclosed within the heterodimer interface contain ATP in an open CFTR channel, ATP hydrolysis in the sole catalytically competent site causes channel closure. Opening of the NBD interface at that site then allows ADP-ATP exchange. But how frequently, and how far, the NBD surfaces separate at the other, inactive composite site remains unclear. We assessed separation at each composite site by monitoring access of nucleotide-sized hydrophilic, thiol-specific methanothiosulfonate (MTS) reagents to interfacial target cysteines introduced into either LSGGQ-like ATP-binding cassette signature sequence (replacing equivalent conserved serines: S549 and S1347). Covalent MTS-dependent modification of either cysteine while channels were kept closed by the absence of ATP impaired subsequent opening upon ATP readdition. Modification while channels were opening and closing in the presence of ATP caused macroscopic CFTR current to decline at the same speed as when the unmodified channels shut upon sudden ATP withdrawal. These results suggest that the target cysteines can be modified only in closed channels; that after modification the attached MTS adduct interferes with ATP-mediated opening; and that modification in the presence of ATP occurs rapidly once channels close, before they can reopen. This interpretation was corroborated by the finding that, for either cysteine target, the addition of the hydrolysis-impairing mutation K1250R (catalytic site Walker A Lys) similarly slowed, by an order of magnitude, channel closing on ATP removal and the speed of modification by MTS reagent in ATP. We conclude that, in every CFTR channel gating cycle, the NBD dimer interface separates simultaneously at both composite sites sufficiently to allow MTS reagents to access both signature-sequence serines. Relatively rapid modification of S1347C channels by larger reagents-MTS-glucose, MTS-biotin, and MTS-rhodamine-demonstrates that, at the noncatalytic composite site, this separation must exceed 8 Å.

Indexed as

Ion Channel GatingAdenosine TriphosphateAmino Acid MotifsAmino Acid SequenceAmino Acid SubstitutionAnimalsCysteineCystic Fibrosis Transmembrane Conductance RegulatorHumansMolecular Sequence DataProtein BindingProtein Structure, TertiaryProtein SubunitsXenopusAdenosine TriphosphateCFTR protein, humanCysteineCystic Fibrosis Transmembrane Conductance RegulatorProtein Subunits

Identifiers

PMID25825169
PMCPMC4380215
OpenAlexW1994600134

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.