Evidence map›Paper›PMID 25824822›Full record

ArticleThe Journal of experimental medicine2015

Consecutive interactions with HSP90 and eEF1A underlie a functional maturation and storage pathway of AID in the cytoplasm.

Stephen P Methot, Ludivine C Litzler, Felipe Trajtenberg, Astrid Zahn, Francis Robert, Jerry Pelletier, Alejandro Buschiazzo, Brad G Magor, Javier M Di Noia

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of experimental medicine, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed, 1 pooled it
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 1 synthesis or guideline pooled it, 44 citations in OpenAlex.

  1. Pooled it
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  13. Plasma cells, plasmablasts, and AIDHistochemistry and cell biology · 2020
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 5 countries.

Stephen P MethotInstitut de Recherches Cliniques de Montréal, Montréal, Québec H2W 1R7, Canada Department of Medicine, Department of Biochemistry, The Rosalind and Morris Goodman Cancer Research Center, and Department of Oncology, McGill University, Montréal, Québec H3A 0G4, Canada.
Ludivine C LitzlerInstitut de Recherches Cliniques de Montréal, Montréal, Québec H2W 1R7, Canada Department of Biochemistry and Department of Medicine, Université de Montréal, Montréal, Québec H3T 1J4, Canada.
Felipe TrajtenbergUnit of Protein Crystallography, Institut Pasteur de Montevideo, Montevideo 11400, Uruguay.
Astrid ZahnInstitut de Recherches Cliniques de Montréal, Montréal, Québec H2W 1R7, Canada.
Francis RobertDepartment of Medicine, Department of Biochemistry, The Rosalind and Morris Goodman Cancer Research Center, and Department of Oncology, McGill University, Montréal, Québec H3A 0G4, Canada.
Jerry PelletierDepartment of Medicine, Department of Biochemistry, The Rosalind and Morris Goodman Cancer Research Center, and Department of Oncology, McGill University, Montréal, Québec H3A 0G4, Canada Department of Medicine, Department of Biochemistry, The Rosalind and Morris Goodman Cancer Research Center, and Department of Oncology, McGill University, Montréal, Québec H3A 0G4, Canada Department of Medicine, Department of Biochemistry, The Rosalind and Morris Goodman Cancer Research Center, and Department of Oncology, McGill University, Montréal, Québec H3A 0G4, Canada.
Alejandro BuschiazzoUnit of Protein Crystallography, Institut Pasteur de Montevideo, Montevideo 11400, Uruguay Department of Structural Biology and Chemistry, Institut Pasteur, 75015 Paris, France.
Brad G MagorDepartment of Biological Sciences, University of Alberta, Edmonton, Alberta T6G 2E9, Canada.
Javier M Di NoiaInstitut de Recherches Cliniques de Montréal, Montréal, Québec H2W 1R7, Canada Department of Medicine, Department of Biochemistry, The Rosalind and Morris Goodman Cancer Research Center, and Department of Oncology, McGill University, Montréal, Québec H3A 0G4, Canada Department of Biochemistry and Department of Medicine, Université de Montréal, Montréal, Québec H3T 1J4, Canada Department of Biochemistry and Department of Medicine, Université de Montréal, Montréal, Québec H3T 1J4, Canada javier.di.noia@ircm.qc.ca.
Institut Pasteur de Montevideo · UYMcGill University · CAMontreal Clinical Research Institute · CACancer Research Center · USUniversité de Montréal · CAUniversity of Alberta · CA

Funding

Canadian Institutes of Health Research MOP125991
6 · The paper itself

Abstract

Activation-induced deaminase (AID) initiates mutagenic pathways to diversify the antibody genes during immune responses. The access of AID to the nucleus is limited by CRM1-mediated nuclear export and by an uncharacterized mechanism of cytoplasmic retention. Here, we define a conformational motif in AID that dictates its cytoplasmic retention and demonstrate that the translation elongation factor eukaryotic elongation factor 1 α (eEF1A) is necessary for AID cytoplasmic sequestering. The mechanism is independent of protein synthesis but dependent on a tRNA-free form of eEF1A. Inhibiting eEF1A prevents the interaction with AID, which accumulates in the nucleus and increases class switch recombination as well as chromosomal translocation byproducts. Most AID is associated to unspecified cytoplasmic complexes. We find that the interactions of AID with eEF1A and heat-shock protein 90 kD (HSP90) are inversely correlated. Despite both interactions stabilizing AID, the nature of the AID fractions associated with HSP90 or eEF1A are different, defining two complexes that sequentially produce and store functional AID in the cytoplasm. In addition, nuclear export and cytoplasmic retention cooperate to exclude AID from the nucleus but might not be functionally equivalent. Our results elucidate the molecular basis of AID cytoplasmic retention, define its functional relevance and distinguish it from other mechanisms regulating AID.

Indexed as

Active Transport, Cell NucleusAICDA (Activation-Induced Cytidine Deaminase)Amino Acid MotifsAnimalsCell NucleusCytidine DeaminaseCytoplasmHEK293 CellsHumansMiceMice, KnockoutMultiprotein ComplexesPeptide Elongation Factor 1Translocation, GeneticAICDA (Activation-Induced Cytidine Deaminase)Cytidine DeaminaseMultiprotein ComplexesPeptide Elongation Factor 1

Identifiers

PMID25824822
PMCPMC4387293
OpenAlexW2148055556

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.