Evidence map›Paper›PMID 25824653›Full record

ArticleEvolution; international journal of organic evolution2015

Genome-wide tests for introgression between cactophilic Drosophila implicate a role of inversions during speciation.

Konrad Lohse, Magnus Clarke, Michael G Ritchie, William J Etges

Open access · hybridAbstract read
In one paragraph

Article in Evolution; international journal of organic evolution, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
9.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 82 citations in OpenAlex.

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  16. Transposable elements inMobile DNA · 2020
    Review
  17. Article
  18. Genetics · 2019
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Konrad LohseInstitute of Evolutionary Biology, University of Edinburgh, Edinburgh EH9 3FL, United Kingdom. konrad.lohse@ed.ac.uk.
Magnus ClarkeInstitute of Evolutionary Biology, University of Edinburgh, Edinburgh EH9 3FL, United Kingdom.
Michael G RitchieSchool of Biology, University of St. Andrews, St. Andrews KY16 9TH, United Kingdom.
William J EtgesProgram in Ecology and Evolutionary Biology, Department of Biological Sciences, University of Arkansas, Fayetteville, Arkansas 72701.
University of Edinburgh · GBUniversity of Arkansas at Fayetteville · USUniversity of St Andrews · GB

Funding

Medical Research Council G0900740Medical Research Council MR/K001744/1
6 · The paper itself

Abstract

Models of speciation-with-gene-flow have shown that the reduction in recombination between alternative chromosome arrangements can facilitate the fixation of locally adaptive genes in the face of gene flow and contribute to speciation. However, it has proven frustratingly difficult to show empirically that inversions have reduced gene flow and arose during or shortly after the onset of species divergence rather than represent ancestral polymorphisms. Here, we present an analysis of whole genome data from a pair of cactophilic fruit flies, Drosophila mojavensis and D. arizonae, which are reproductively isolated in the wild and differ by several large inversions on three chromosomes. We found an increase in divergence at rearranged compared to colinear chromosomes. Using the density of divergent sites in short sequence blocks we fit a series of explicit models of species divergence in which gene flow is restricted to an initial period after divergence and may differ between colinear and rearranged parts of the genome. These analyses show that D. mojavensis and D. arizonae have experienced postdivergence gene flow that ceased around 270 KY ago and was significantly reduced in chromosomes with fixed inversions. Moreover, we show that these inversions most likely originated around the time of species divergence which is compatible with theoretical models that posit a role of inversions in speciation with gene flow.

Indexed as

Chromosome InversionGenetic SpeciationGenome, InsectAnimalsChromosomes, InsectDrosophilaEvolution, MolecularGene FlowPolymorphism, Geneticdivergence genomicsDrosophila arizonaeDrosophila mojavensisinversionsSpeciation with gene flow

Identifiers

PMID25824653
PMCPMC5029762
OpenAlexW1519251415

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.