Evidence map›Paper›PMID 25824290›Full record

ArticleeLife2015

A library of MiMICs allows tagging of genes and reversible, spatial and temporal knockdown of proteins in Drosophila.

Sonal Nagarkar-Jaiswal, Pei-Tseng Lee, Megan E Campbell, Kuchuan Chen, Stephanie Anguiano-Zarate, Manuel Cantu Gutierrez, Theodore Busby, Wen-Wen Lin, Yuchun He, Karen L Schulze and 7 more

Abstract read
In one paragraph

Article in eLife, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 278 papers.

0numbers the graph read from it
0cells of the map it votes in
278citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

278 citing papers in PubMed.

  1. Article
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  8. Togaram Ensures Axial Alignment of the Sperm Neck.bioRxiv : the preprint server for biology · 2026
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  9. Phage display-mediated immuno-PCR to detect low-abundance secreted proteins inProceedings of the National Academy of Sciences of the United States of America · 2026
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  12. Pro-tumoral CaScientific reports · 2026
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  15. Article
  16. Article
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  18. Article
  19. Genetic interaction ofFrontiers in neuroscience · 2026
    Article
  20. Article

218 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Sonal Nagarkar-JaiswalDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, United States.
Pei-Tseng LeeDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, United States.
Megan E CampbellDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, United States.
Kuchuan ChenProgram in Developmental Biology, Baylor College of Medicine, Houston, United States.
Stephanie Anguiano-ZarateDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, United States.
Manuel Cantu GutierrezDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, United States.
Theodore BusbyDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, United States.
Wen-Wen LinDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, United States.
Yuchun HeHoward Hughes Medical Institute, Baylor College of Medicine, Houston, United States.
Karen L SchulzeHoward Hughes Medical Institute, Baylor College of Medicine, Houston, United States.
Benjamin W BoothLife Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, United States.
Martha Evans-HolmLife Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, United States.
Koen J T VenkenVerna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, United States.
Robert W LevisDepartment of Embryology, Howard Hughes Medical Institute, Carnegie Institution for Science, Baltimore, United States.
Allan C SpradlingDepartment of Embryology, Howard Hughes Medical Institute, Carnegie Institution for Science, Baltimore, United States.
Roger A HoskinsLife Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, United States.
Hugo J BellenDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, United States.

Funding

UNDERSTANDING FXTAS AMONG MALES WITH THE FMR1 PREMUTATIONP30HD024064 · NICHD · BAYLOR COLLEGE OF MEDICINE · PI TOLIAS, KIMBERLY R · 1988 to 2013
$29.4M
Transposon induced disruption of most Drosophila genesR01GM067858 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI BELLEN, HUGO J · 2003 to 2020
$15.7M
NEUROSCIENCE TRAINING PROGRAMT32GM007507 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI HALLORAN, MARY C · 1985 to 2017
$9.3M
Steps towards a paternal gene activation therapy for Angelman syndromeU54HD083092 · NICHD · BAYLOR COLLEGE OF MEDICINE · PI NELSON, DAVID LOREN, NEUL, JEFFREY L · 2014 to 2019
$7.8M
Mutidisciplinary Training;Brain Disorders &DevelopmentT32NS043124 · NINDS · BAYLOR COLLEGE OF MEDICINE · PI SWANN, JOHN WILLIAM · 2002 to 2021
$4.6M
Using cell and fly models to understand gene function in undiagnosed diseasesR21GM110190 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI GRAHAM, BRETT HARRISON · 2014 to 2015
$470k
Howard Hughes Medical InstituteNICHD NIH HHS P30 HD024064NICHD NIH HHS P30HD024064NICHD NIH HHS U54 HD083092NIGMS NIH HHS 1R21GM110190NIGMS NIH HHS 3R01GM067858-11S1NIGMS NIH HHS R01 GM067858NIGMS NIH HHS R01GM067858NIGMS NIH HHS R21 GM110190NIGMS NIH HHS T32 GM007507NINDS NIH HHS T32 NS043124
6 · The paper itself

Abstract

Here, we document a collection of ∼7434 MiMIC (Minos Mediated Integration Cassette) insertions of which 2854 are inserted in coding introns. They allowed us to create a library of 400 GFP-tagged genes. We show that 72% of internally tagged proteins are functional, and that more than 90% can be imaged in unfixed tissues. Moreover, the tagged mRNAs can be knocked down by RNAi against GFP (iGFPi), and the tagged proteins can be efficiently knocked down by deGradFP technology. The phenotypes associated with RNA and protein knockdown typically correspond to severe loss of function or null mutant phenotypes. Finally, we demonstrate reversible, spatial, and temporal knockdown of tagged proteins in larvae and adult flies. This new strategy and collection of strains allows unprecedented in vivo manipulations in flies for many genes. These strategies will likely extend to vertebrates.

Indexed as

Gene LibraryMutagenesis, InsertionalRNA Interferencealpha CateninAnimalsAnimals, Genetically ModifiedBlotting, WesternBrainDNA Transposable ElementsDrosophila melanogasterDrosophila ProteinsGene ExpressionGreen Fluorescent ProteinsLarvaLearningMicroscopy, Confocalalpha CateninBRP protein, Drosophiladlg1 protein, DrosophilaDNA Transposable ElementsDrosophila ProteinsGreen Fluorescent ProteinsTumor Suppressor Proteinsbruchpilotcell biologydeGradFPdiscs large 1D. melanogasterdunceiGFPineuroscienceRMCE

Identifiers

PMID25824290
PMCPMC4379497

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.