Evidence map›Paper›PMID 25823586›Full record

ArticleG3 (Bethesda, Md.)2015

Single-Cell Based Quantitative Assay of Chromosome Transmission Fidelity.

Jin Zhu, Dominic Heinecke, Wahid A Mulla, William D Bradford, Boris Rubinstein, Andrew Box, Jeffrey S Haug, Rong Li

Open access · goldAbstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.3field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 28 citations in OpenAlex.

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  14. Overexpression screens identify conserved dosage chromosome instability genes in yeast and human cancer.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Jin ZhuStowers Institute for Medical Research, 1000 East 50th Street, Kansas City, Missouri 64110.
Dominic HeineckeStowers Institute for Medical Research, 1000 East 50th Street, Kansas City, Missouri 64110.
Wahid A MullaStowers Institute for Medical Research, 1000 East 50th Street, Kansas City, Missouri 64110 Department of Molecular and Integrative Physiology, University of Kansas Medical Center, 3901 Rainbow Boulevard, Kansas City, Kansas 66160.
William D BradfordStowers Institute for Medical Research, 1000 East 50th Street, Kansas City, Missouri 64110.
Boris RubinsteinStowers Institute for Medical Research, 1000 East 50th Street, Kansas City, Missouri 64110.
Andrew BoxStowers Institute for Medical Research, 1000 East 50th Street, Kansas City, Missouri 64110.
Jeffrey S HaugStowers Institute for Medical Research, 1000 East 50th Street, Kansas City, Missouri 64110.
Rong LiStowers Institute for Medical Research, 1000 East 50th Street, Kansas City, Missouri 64110 Department of Molecular and Integrative Physiology, University of Kansas Medical Center, 3901 Rainbow Boulevard, Kansas City, Kansas 66160 rli@stowers.org.ORCID http://orcid.org/0000-0002-1185-7283
Stowers Institute for Medical Research · USUniversity of Kansas Medical Center · US

Funding

The Mechanism and Regulation of Cytokinesis in YeastR01GM059964 · NIGMS · STOWERS INSTITUTE FOR MEDICAL RESEARCH · PI LI, RONG · 1999 to 2015
$4.8M
NIGMS NIH HHS R01 GM059964NIGMS NIH HHS R01GM059964
6 · The paper itself

Abstract

Errors in mitosis are a primary cause of chromosome instability (CIN), generating aneuploid progeny cells. Whereas a variety of factors can influence CIN, under most conditions mitotic errors are rare events that have been difficult to measure accurately. Here we report a green fluorescent protein-based quantitative chromosome transmission fidelity (qCTF) assay in budding yeast that allows sensitive and quantitative detection of CIN and can be easily adapted to high-throughput analysis. Using the qCTF assay, we performed genome-wide quantitative profiling of genes that affect CIN in a dosage-dependent manner and identified genes that elevate CIN when either increased (icCIN) or decreased in copy number (dcCIN). Unexpectedly, qCTF screening also revealed genes whose change in copy number quantitatively suppress CIN, suggesting that the basal error rate of the wild-type genome is not minimized, but rather, may have evolved toward an optimal level that balances both stability and low-level karyotype variation for evolutionary adaptation.

Indexed as

Chromosomal InstabilityChromosomes, FungalFluorescenceGene DosageGene Expression ProfilingGenes, SuppressorGenome, FungalOpen Reading FramesReproducibility of ResultsSaccharomyces cerevisiaeSingle-Cell Analysischromosome instabilitydosage-sensitive genemitosisqCTF assay

Identifiers

PMID25823586
PMCPMC4478535
OpenAlexW2108147869

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.