Evidence map›Paper›PMID 25822635›Full record

ArticlePloS one2015

Chemical and thermal unfolding of a global staphylococcal virulence regulator with a flexible C-terminal end.

Avisek Mahapa, Sukhendu Mandal, Anindya Biswas, Biswanath Jana, Soumitra Polley, Subrata Sau, Keya Sau

Abstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Avisek MahapaDepartment of Biotechnology, Haldia Institute of Technology, Haldia, West Bengal, India.
Sukhendu MandalDepartment of Biochemistry, Bose Institute, Kolkata, West Bengal, India.
Anindya BiswasDepartment of Biochemistry, Bose Institute, Kolkata, West Bengal, India.
Biswanath JanaDepartment of Biochemistry, Bose Institute, Kolkata, West Bengal, India.
Soumitra PolleyDepartment of Biochemistry, Bose Institute, Kolkata, West Bengal, India.
Subrata SauDepartment of Biochemistry, Bose Institute, Kolkata, West Bengal, India.
Keya SauDepartment of Biotechnology, Haldia Institute of Technology, Haldia, West Bengal, India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

SarA, a Staphylococcus aureus-specific dimeric protein, modulates the expression of numerous proteins including various virulence factors. Interestingly, S. aureus synthesizes multiple SarA paralogs seemingly for optimizing the expression of its virulence factors. To understand the domain structure/flexibility and the folding/unfolding mechanism of the SarA protein family, we have studied a recombinant SarA (designated rSarA) using various in vitro probes. Limited proteolysis of rSarA and the subsequent analysis of the resulting protein fragments suggested it to be a single-domain protein with a long, flexible C-terminal end. rSarA was unfolded by different mechanisms in the presence of different chemical and physical denaturants. While urea-induced unfolding of rSarA occurred successively via the formation of a dimeric and a monomeric intermediate, GdnCl-induced unfolding of this protein proceeded through the production of two dimeric intermediates. The surface hydrophobicity and the structures of the intermediates were not identical and also differed significantly from those of native rSarA. Of the intermediates, the GdnCl-generated intermediates not only possessed a molten globule-like structure but also exhibited resistance to dissociation during their unfolding. Compared to the native rSarA, the intermediate that was originated at lower GdnCl concentration carried a compact shape, whereas, other intermediates owned a swelled shape. The chemical-induced unfolding, unlike thermal unfolding of rSarA, was completely reversible in nature.

Indexed as

Protein UnfoldingBacterial ProteinsGuanidineHydrophobic and Hydrophilic InteractionsModels, MolecularMultigene FamilyProtein ConformationProtein Structure, TertiaryRecombinant ProteinsStaphylococcus aureusTemperatureUreaBacterial ProteinsGuanidineRecombinant ProteinsSarA protein, Staphylococcus aureusUrea

Identifiers

PMID25822635
PMCPMC4379015

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.