Evidence map›Paper›PMID 25822502›Full record

ArticlePLoS genetics2015

A role for the budding yeast separase, Esp1, in Ty1 element retrotransposition.

Krystina L Ho, Lina Ma, Stephanie Cheung, Savrina Manhas, Nancy Fang, Kaiqian Wang, Barry Young, Christopher Loewen, Thibault Mayor, Vivien Measday

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
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  5. PP2AJournal of cell science · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Krystina L HoDepartment of Biochemistry and Molecular Biology, University of British Columbia, Vancouver, British Columbia, Canada; Wine Research Centre, University of British Columbia, Vancouver, British Columbia, Canada.
Lina MaWine Research Centre, University of British Columbia, Vancouver, British Columbia, Canada.
Stephanie CheungDepartment of Biochemistry and Molecular Biology, University of British Columbia, Vancouver, British Columbia, Canada; Wine Research Centre, University of British Columbia, Vancouver, British Columbia, Canada.
Savrina ManhasDepartment of Biochemistry and Molecular Biology, University of British Columbia, Vancouver, British Columbia, Canada; Wine Research Centre, University of British Columbia, Vancouver, British Columbia, Canada.
Nancy FangDepartment of Biochemistry and Molecular Biology, University of British Columbia, Vancouver, British Columbia, Canada; Centre for High-Throughput Biology, University of British Columbia, Vancouver, British Columbia, Canada.
Kaiqian WangDepartment of Biochemistry and Molecular Biology, University of British Columbia, Vancouver, British Columbia, Canada; Wine Research Centre, University of British Columbia, Vancouver, British Columbia, Canada.
Barry YoungDepartment of Cellular and Physiological Sciences, University of British Columbia, Vancouver, British Columbia, Canada.
Christopher LoewenDepartment of Cellular and Physiological Sciences, University of British Columbia, Vancouver, British Columbia, Canada.
Thibault MayorDepartment of Biochemistry and Molecular Biology, University of British Columbia, Vancouver, British Columbia, Canada; Centre for High-Throughput Biology, University of British Columbia, Vancouver, British Columbia, Canada.
Vivien MeasdayDepartment of Biochemistry and Molecular Biology, University of British Columbia, Vancouver, British Columbia, Canada; Wine Research Centre, University of British Columbia, Vancouver, British Columbia, Canada.
University of British Columbia · CA

Funding

Canadian Institutes of Health Research HOP-131559Canadian Institutes of Health Research MOP-79497Canadian Institutes of Health Research MOP-84242Canadian Institutes of Health Research MOP-89838
6 · The paper itself

Abstract

Separase/Esp1 is a protease required at the onset of anaphase to cleave cohesin and thereby enable sister chromatid separation. Esp1 also promotes release of the Cdc14 phosphatase from the nucleolus to enable mitotic exit. To uncover other potential roles for separase, we performed two complementary genome-wide genetic interaction screens with a strain carrying the budding yeast esp1-1 separase mutation. We identified 161 genes that when mutated aggravate esp1-1 growth and 44 genes that upon increased dosage are detrimental to esp1-1 viability. In addition to the expected cell cycle and sister chromatid segregation genes that were identified, 24% of the genes identified in the esp1-1 genetic screens have a role in Ty1 element retrotransposition. Retrotransposons, like retroviruses, replicate through reverse transcription of an mRNA intermediate and the resultant cDNA product is integrated into the genome by a conserved transposon or retrovirus encoded integrase protein. We purified Esp1 from yeast and identified an interaction between Esp1 and Ty1 integrase using mass spectrometry that was subsequently confirmed by co-immunoprecipitation analysis. Ty1 transposon mobility and insertion upstream of the SUF16 tRNA gene are both reduced in an esp1-1 strain but increased in cohesin mutant strains. Securin/Pds1, which is required for efficient localization of Esp1 to the nucleus, is also required for efficient Ty1 transposition. We propose that Esp1 serves two roles to mediate Ty1 transposition - one to remove cohesin and the second to target Ty1-IN to chromatin.

Indexed as

Cell Cycle ProteinsCell NucleolusChromatinChromosomal Proteins, Non-HistoneChromosome SegregationCohesinsDNA, ComplementaryMitosisRetroelementsRNA, TransferSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSecurinSeparaseCell Cycle ProteinsChromatinChromosomal Proteins, Non-HistoneCohesinsDNA, ComplementaryESP1 protein, S cerevisiaePDS1 protein, S cerevisiaeRetroelementsRNA, TransferSaccharomyces cerevisiae ProteinsSecurinSeparase

Identifiers

PMID25822502
PMCPMC4378997
OpenAlexW2037138849

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.