Evidence map›Paper›PMID 25821509›Full record

ArticleComputational and mathematical methods in medicine2015

A sparse representation based method to classify pulmonary patterns of diffuse lung diseases.

Wei Zhao, Rui Xu, Yasushi Hirano, Rie Tachibana, Shoji Kido

Abstract read
In one paragraph

Article in Computational and mathematical methods in medicine, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

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3citing papers in PubMed
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3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

5 authors.

Wei ZhaoMedical Engineering Science, Graduate School of Medicine, Yamaguchi University, Ube 755-8611, Japan.ORCID 0000-0001-5081-7025
Rui XuGlobal Innovation Research Organization, Ritsumeikan University, Kusatsu 525-8577, Japan.
Yasushi HiranoMedical Engineering Science, Graduate School of Medicine, Yamaguchi University, Ube 755-8611, Japan.ORCID 0000-0001-9707-4222
Rie TachibanaNational Institute of Technology, Oshima College, Oshima 742-2193, Japan.
Shoji KidoMedical Engineering Science, Graduate School of Medicine, Yamaguchi University, Ube 755-8611, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We applied and optimized the sparse representation (SR) approaches in the computer-aided diagnosis (CAD) to classify normal tissues and five kinds of diffuse lung disease (DLD) patterns: consolidation, ground-glass opacity, honeycombing, emphysema, and nodule. By using the K-SVD which is based on the singular value decomposition (SVD) and orthogonal matching pursuit (OMP), it can achieve a satisfied recognition rate, but too much time was spent in the experiment. To reduce the runtime of the method, the K-Means algorithm was substituted for the K-SVD, and the OMP was simplified by searching the desired atoms at one time (OMP1). We proposed three SR based methods for evaluation: SR1 (K-SVD+OMP), SR2 (K-Means+OMP), and SR3 (K-Means+OMP1). 1161 volumes of interest (VOIs) were used to optimize the parameters and train each method, and 1049 VOIs were adopted to evaluate the performances of the methods. The SR based methods were powerful to recognize the DLD patterns (SR1: 96.1%, SR2: 95.6%, SR3: 96.4%) and significantly better than the baseline methods. Furthermore, when the K-Means and OMP1 were applied, the runtime of the SR based methods can be reduced by 98.2% and 55.2%, respectively. Therefore, we thought that the method using the K-Means and OMP1 (SR3) was efficient for the CAD of the DLDs.

Indexed as

AlgorithmsComputer SimulationDiagnosis, Computer-AssistedHumansImage Processing, Computer-AssistedLungLung DiseasesModels, StatisticalPattern Recognition, AutomatedProgramming LanguagesRadiographic Image Interpretation, Computer-AssistedReproducibility of ResultsSensitivity and SpecificitySoftwareTomography, X-Ray Computed

Identifiers

PMID25821509
PMCPMC4363677

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.