Evidence map›Paper›PMID 25819715›Full record

ArticleScientific reports2015

Phylogenomic analysis uncovers the evolutionary history of nutrition and infection mode in rice blast fungus and other Magnaporthales.

Jing Luo, Huan Qiu, Guohong Cai, Nicole E Wagner, Debashish Bhattacharya, Ning Zhang

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 37 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Nematode-Trapping Fungi.Microbiology spectrum · 2017
    Review
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Take-all or nothing.Studies in mycology · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Jing LuoDepartment of Plant Biology and Pathology, Rutgers University, Foran Hall 201, 59 Dudley Road, New Brunswick, New Jersey 08901.
Huan QiuDepartment of Ecology, Evolution, and Natural Resources, Rutgers University, Foran Hall 102, 59 Dudley Road, New Brunswick, New Jersey 08901.
Guohong CaiNational Animal Disease Center, USDA, PO Box 70, 1920 Dayton Ave, Ames, Iowa 50010.
Nicole E WagnerDepartment of Ecology, Evolution, and Natural Resources, Rutgers University, Foran Hall 102, 59 Dudley Road, New Brunswick, New Jersey 08901.
Debashish BhattacharyaDepartment of Ecology, Evolution, and Natural Resources, Rutgers University, Foran Hall 102, 59 Dudley Road, New Brunswick, New Jersey 08901.
Ning Zhang1] Department of Plant Biology and Pathology, Rutgers University, Foran Hall 201, 59 Dudley Road, New Brunswick, New Jersey 08901 [2] Department of Biochemistry and Microbiology, Rutgers University, 76 Lipman Drive, New Brunswick, New Jersey 08901.
Rutgers, The State University of New Jersey · USNational Animal Disease Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The order Magnaporthales (Ascomycota, Fungi) includes devastating pathogens of cereals, such as the rice blast fungus Pyricularia (Magnaporthe) oryzae, which is a model in host-pathogen interaction studies. Magnaporthales also includes saprotrophic species associated with grass roots and submerged wood. Despite its scientific and economic importance, the phylogenetic position of Magnaporthales within Sordariomycetes and the interrelationships of its constituent taxa, remain controversial. In this study, we generated novel transcriptome data from 21 taxa that represent key Magnaporthales lineages of different infection and nutrition modes and phenotypes. Phylogenomic analysis of >200 conserved genes allowed the reconstruction of a robust Sordariomycetes tree of life that placed the monophyletic group of Magnaporthales sister to Ophiostomatales. Among Magnaporthales, three major clades were recognized: 1) an early diverging clade A comprised of saprotrophs associated with submerged woods; 2) clade B that includes the rice blast fungus and other pathogens that cause blast diseases of monocot plants. These species infect the above-ground tissues of host plants using the penetration structure, appressorium; and 3) clade C comprised primarily of root-associated species that penetrate the root tissue with hyphopodia. The well-supported phylogenies provide a robust framework for elucidating evolution of pathogenesis, nutrition modes, and phenotypic characters in Magnaporthales.

Indexed as

Biological EvolutionPhylogenyAscomycotaFungal ProteinsGenome, PlantHost-Pathogen InteractionsOryzaPlant DiseasesTranscriptomeFungal Proteins

Identifiers

PMID25819715
PMCPMC4377577
OpenAlexW2078872274

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.