Evidence map›Paper›PMID 25818299›Full record

ArticleCell reports2015

Structure and function of Neisseria gonorrhoeae MtrF illuminates a class of antimetabolite efflux pumps.

Chih-Chia Su, Jani Reddy Bolla, Nitin Kumar, Abhijith Radhakrishnan, Feng Long, Jared A Delmar, Tsung-Han Chou, Kanagalaghatta R Rajashankar, William M Shafer, Edward W Yu

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed, 1 pooled it
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 1 synthesis or guideline pooled it, 56 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Review
  6. TheScience advances · 2024
    Article
  7. The complete catalog of antimicrobial resistance secondary active transporters inComputational and structural biotechnology journal · 2024
    Article
  8. Article
  9. Article
  10. Article
  11. Metabolites · 2021
    Review
  12. Article
  13. Article
  14. Review
  15. Article
  16. Elevator-type mechanisms of membrane transport.Biochemical Society transactions · 2020
    Review
  17. Structural, Biochemical, andJournal of bacteriology · 2019
    Article
  18. Structure and Mechanism of the Divalent Anion/Na⁺ Symporter.International journal of molecular sciences · 2019
    Review
  19. Quantitative Proteomics of the 2016 WHOMolecular & cellular proteomics : MCP · 2019
    Article
  20. Structural models of the NaPi-II sodium-phosphate cotransporters.Pflugers Archiv : European journal of physiology · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Chih-Chia SuDepartment of Physics and Astronomy, Iowa State University, Ames, IA 50011, USA.
Jani Reddy BollaDepartment of Chemistry, Iowa State University, Ames, IA 50011, USA.
Nitin KumarDepartment of Chemistry, Iowa State University, Ames, IA 50011, USA.
Abhijith RadhakrishnanDepartment of Chemistry, Iowa State University, Ames, IA 50011, USA.
Feng LongDepartment of Physics and Astronomy, Iowa State University, Ames, IA 50011, USA.
Jared A DelmarDepartment of Physics and Astronomy, Iowa State University, Ames, IA 50011, USA.
Tsung-Han ChouDepartment of Physics and Astronomy, Iowa State University, Ames, IA 50011, USA.
Kanagalaghatta R RajashankarNE-CAT and Department of Chemistry and Chemical Biology, Cornell University, Building 436E, Argonne National Laboratory, 9700 S. Cass Avenue, Argonne, IL 60439, USA.
William M ShaferDepartment of Microbiology and Immunology, Emory University School of Medicine, Atlanta, GA 30322, USA; Laboratories of Microbial Pathogenesis, VA Medical Center, Decatur, GA 30033, USA; Emory Antibiotic Resistance Center, Emory University, Atlanta, GA 30322, USA.
Edward W YuDepartment of Physics and Astronomy, Iowa State University, Ames, IA 50011, USA; Department of Chemistry, Iowa State University, Ames, IA 50011, USA. Electronic address: ewyu@iastate.edu.
Iowa State University · USCornell University · USEmory University · US

Funding

Overall EvaluationP41GM103403 · NIGMS · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2012 to 2017
$14.3M
Gonococci: Genetics of Resistance to PMN ProteinsR37AI021150 · NIAID · EMORY UNIVERSITY · PI SHAFER, WILLIAM MAURICE · 2010 to 2019
$3.9M
Metal ion export in bacteriaR01GM086431 · NIGMS · IOWA STATE UNIVERSITY · PI YU, EDWARD W · 2010 to 2013
$1.1M
NIAID NIH HHS R37 AI021150NIAID NIH HHS R37AI021150NIGMS NIH HHS GM103403NIGMS NIH HHS P41 GM103403NIGMS NIH HHS R01 GM086431NIGMS NIH HHS R01GM086431
6 · The paper itself

Abstract

Neisseria gonorrhoeae is an obligate human pathogen and the causative agent of the sexually transmitted disease gonorrhea. The control of this disease has been compromised by the increasing proportion of infections due to antibiotic-resistant strains, which are growing at an alarming rate. N. gonorrhoeae MtrF is an integral membrane protein that belongs to the AbgT family of transporters for which no structural information is available. Here, we describe the crystal structure of MtrF, revealing a dimeric molecule with architecture distinct from all other families of transporters. MtrF is a bowl-shaped dimer with a solvent-filled basin extending from the cytoplasm to halfway across the membrane bilayer. Each subunit of the transporter contains nine transmembrane helices and two hairpins, posing a plausible pathway for substrate transport. A combination of the crystal structure and biochemical functional assays suggests that MtrF is an antibiotic efflux pump mediating bacterial resistance to sulfonamide antimetabolite drugs.

Indexed as

Amino Acid SequenceAnti-Bacterial AgentsBacterial ProteinsCrystallography, X-RayDrug Resistance, BacterialGene Expression Regulation, BacterialGonorrheaHumansModels, MolecularNeisseria gonorrhoeaeProtein ConformationRepressor ProteinsStructure-Activity RelationshipSulfonamidesAnti-Bacterial AgentsBacterial ProteinsmtrR protein, Neisseria gonorrhoeaeRepressor ProteinsSulfonamides

Identifiers

PMID25818299
PMCPMC4410016
OpenAlexW2082055834

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.