Evidence map›Paper›PMID 25815818›Full record

ArticlePloS one2015

Cleavage of Dicer protein by I7 protease during vaccinia virus infection.

Jhih-Si Chen, Hui-Chun Li, Shu-I Lin, Chee-Hing Yang, Wan-Yu Chien, Ciao-Ling Syu, Shih-Yen Lo

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
3.6field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Translational control during poxvirus infection.Wiley interdisciplinary reviews. RNA · 2019
    Review
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Jhih-Si ChenDepartment of Laboratory Medicine and Medical Biotechnology, Tzu Chi University, Hualien, Taiwan.
Hui-Chun LiDepartment of Biochemistry, Tzu Chi University, Hualien, Taiwan.
Shu-I LinDepartment of Laboratory Medicine and Medical Biotechnology, Tzu Chi University, Hualien, Taiwan.
Chee-Hing YangDepartment of Laboratory Medicine and Medical Biotechnology, Tzu Chi University, Hualien, Taiwan.
Wan-Yu ChienDepartment of Laboratory Medicine and Medical Biotechnology, Tzu Chi University, Hualien, Taiwan.
Ciao-Ling SyuDepartment of Laboratory Medicine and Medical Biotechnology, Tzu Chi University, Hualien, Taiwan.
Shih-Yen LoDepartment of Laboratory Medicine and Medical Biotechnology, Tzu Chi University, Hualien, Taiwan; Department of Laboratory Medicine, Buddhist Tzu Chi General Hospital, Hualien, Taiwan.
Tzu Chi University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Dicer is the key component in the miRNA pathway. Degradation of Dicer protein is facilitated during vaccinia virus (VV) infection. A C-terminal cleaved product of Dicer protein was detected in the presence of MG132 during VV infection. Thus, it is possible that Dicer protein is cleaved by a viral protease followed by proteasome degradation of the cleaved product. There is a potential I7 protease cleavage site in the C-terminus of Dicer protein. Indeed, reduction of Dicer protein was detected when Dicer was co-expressed with I7 protease but not with an I7 protease mutant protein lack of the protease activity. Mutation of the potential I7 cleavage site in the C-terminus of Dicer protein resisted its degradation during VV infection. Furthermore, Dicer protein was reduced dramatically by recombinant VV vI7Li after the induction of I7 protease. If VV could facilitate the degradation of Dicer protein, the process of miRNA should be affected by VV infection. Indeed, accumulation of precursor miR122 was detected after VV infection or I7 protease expression. Reduction of miR122 would result in the suppression of HCV sub-genomic RNA replication, and, in turn, the amount of viral proteins. As expected, significant reduction of HCVNS5A protein was detected after VV infection and I7 protease expression. Therefore, our results suggest that VV could cleave Dicer protein through I7 protease to facilitate Dicer degradation, and in turn, suppress the processing of miRNAs. Effect of Dicer protein on VV replication was also studied. Exogenous expression of Dicer protein suppresses VV replication slightly while knockdown of Dicer protein does not affect VV replication significantly.

Indexed as

Blotting, WesternCytokinesisDEAD-box RNA HelicasesHumansMicroRNAsProtein Processing, Post-TranslationalReal-Time Polymerase Chain ReactionReverse Transcriptase Polymerase Chain ReactionRibonuclease IIIRNA-Dependent RNA PolymeraseRNA, MessengerTumor Cells, CulturedVacciniaVaccinia virusViral Core ProteinsViral Nonstructural ProteinsDEAD-box RNA HelicasesDICER1 protein, humanMicroRNAsMIRN122 microRNA, humanNS-5 protein, hepatitis C virusprotein I7, vaccinia virusRibonuclease IIIRNA-Dependent RNA PolymeraseRNA, MessengerViral Core ProteinsViral Nonstructural Proteins

Identifiers

PMID25815818
PMCPMC4376780
OpenAlexW1963515038

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.