Evidence map›Paper›PMID 25811884›Full record

ArticlePloS one2015

Phenotypic profiling of Scedosporium aurantiacum, an opportunistic pathogen colonizing human lungs.

Jashanpreet Kaur, Shu Yao Duan, Lea A I Vaas, Anahit Penesyan, Wieland Meyer, Ian T Paulsen, Helena Nevalainen

Abstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Stress adaptation underMicrobiology spectrum · 2025
    Article
  2. Article
  3. Journal of fungi (Basel, Switzerland) · 2021
    Review
  4. Rearing and Maintenance ofJournal of fungi (Basel, Switzerland) · 2020
    Review
  5. Microbial high throughput phenomics: The potential of an irreplaceable omics.Computational and structural biotechnology journal · 2020
    Review
  6. Article
  7. Article
  8. Case ofMedical mycology case reports · 2018
    Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Jashanpreet KaurDepartment of Chemistry and Biomolecular Sciences, Macquarie University, Sydney, Australia; Biomolecular Frontiers Research Centre, Macquarie University, Sydney, Australia.
Shu Yao DuanMolecular Mycology Research Laboratory, Centre for Infectious Diseases and Microbiology, Marie Bashir Institute for Infectious Diseases and Biosecurity, Sydney Medical School-Westmead Hospital, The University of Sydney, Westmead Millennium Institute, Sydney, Australia.
Lea A I VaasMolecular Mycology Research Laboratory, Centre for Infectious Diseases and Microbiology, Marie Bashir Institute for Infectious Diseases and Biosecurity, Sydney Medical School-Westmead Hospital, The University of Sydney, Westmead Millennium Institute, Sydney, Australia; Bioinformatics Group, Centralbureau voor Schimmelculturen-Fungal Biodiversity Centre, Utrecht, The Netherlands.
Anahit PenesyanDepartment of Chemistry and Biomolecular Sciences, Macquarie University, Sydney, Australia; Biomolecular Frontiers Research Centre, Macquarie University, Sydney, Australia.
Wieland MeyerMolecular Mycology Research Laboratory, Centre for Infectious Diseases and Microbiology, Marie Bashir Institute for Infectious Diseases and Biosecurity, Sydney Medical School-Westmead Hospital, The University of Sydney, Westmead Millennium Institute, Sydney, Australia.
Ian T PaulsenDepartment of Chemistry and Biomolecular Sciences, Macquarie University, Sydney, Australia; Biomolecular Frontiers Research Centre, Macquarie University, Sydney, Australia.
Helena NevalainenDepartment of Chemistry and Biomolecular Sciences, Macquarie University, Sydney, Australia; Biomolecular Frontiers Research Centre, Macquarie University, Sydney, Australia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genotyping studies of Australian Scedosporium isolates have revealed the strong prevalence of a recently described species: Scedosporium aurantiacum. In addition to occurring in the environment, this fungus is also known to colonise the respiratory tracts of cystic fibrosis (CF) patients. A high throughput Phenotype Microarray (PM) analysis using 94 assorted substrates (sugars, amino acids, hexose-acids and carboxylic acids) was carried out for four isolates exhibiting different levels of virulence, determined using a Galleria mellonella infection model. A significant difference was observed in the substrate utilisation patterns of strains displaying differential virulence. For example, certain sugars such as sucrose (saccharose) were utilised only by low virulence strains whereas some sugar derivatives such as D-turanose promoted respiration only in the more virulent strains. Strains with a higher level of virulence also displayed flexibility and metabolic adaptability at two different temperature conditions tested (28 and 37°C). Phenotype microarray data were integrated with the whole-genome sequence data of S. aurantiacum to reconstruct a pathway map for the metabolism of selected substrates to further elucidate differences between the strains.

Indexed as

Opportunistic InfectionsAmino AcidsColony Count, MicrobialEnergy MetabolismGenome, BacterialHumansLung Diseases, FungalMetabolic Networks and PathwaysScedosporiumVirulenceAmino Acids

Identifiers

PMID25811884
PMCPMC4374879

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.