Evidence map›Paper›PMID 25811607›Full record

ArticlePloS one2015

Plastidic phosphoglucose isomerase is an important determinant of starch accumulation in mesophyll cells, growth, photosynthetic capacity, and biosynthesis of plastidic cytokinins in Arabidopsis.

Abdellatif Bahaji, Ángela M Sánchez-López, Nuria De Diego, Francisco J Muñoz, Edurne Baroja-Fernández, Jun Li, Adriana Ricarte-Bermejo, Marouane Baslam, Iker Aranjuelo, Goizeder Almagro and 5 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
8.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 45 citations in OpenAlex.

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  20. The Mechanism of Starch Over-Accumulation inFrontiers in microbiology · 2017
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 2 countries.

Abdellatif BahajiInstituto de Agrobiotecnología (CSIC/UPNA/Gobierno de Navarra), Iruñako etorbidea 123, Mutiloabeti, Nafarroa, 31192, Spain.
Ángela M Sánchez-LópezInstituto de Agrobiotecnología (CSIC/UPNA/Gobierno de Navarra), Iruñako etorbidea 123, Mutiloabeti, Nafarroa, 31192, Spain.
Nuria De DiegoDepartment of Chemical Biology and Genetics, Centre of the Region Haná for Biotechnological and Agricultural Research, Faculty of Science, Palacký University, Olomouc, CZ-78371, Czech Republic.
Francisco J MuñozInstituto de Agrobiotecnología (CSIC/UPNA/Gobierno de Navarra), Iruñako etorbidea 123, Mutiloabeti, Nafarroa, 31192, Spain.
Edurne Baroja-FernándezInstituto de Agrobiotecnología (CSIC/UPNA/Gobierno de Navarra), Iruñako etorbidea 123, Mutiloabeti, Nafarroa, 31192, Spain.
Jun LiInstituto de Agrobiotecnología (CSIC/UPNA/Gobierno de Navarra), Iruñako etorbidea 123, Mutiloabeti, Nafarroa, 31192, Spain.
Adriana Ricarte-BermejoInstituto de Agrobiotecnología (CSIC/UPNA/Gobierno de Navarra), Iruñako etorbidea 123, Mutiloabeti, Nafarroa, 31192, Spain.
Marouane BaslamInstituto de Agrobiotecnología (CSIC/UPNA/Gobierno de Navarra), Iruñako etorbidea 123, Mutiloabeti, Nafarroa, 31192, Spain.
Iker AranjueloPlant Biology and Ecology Department, Science and Technology Faculty, University of the Basque Country, Barrio Sarriena, 48940 Leioa, Spain.
Goizeder AlmagroInstituto de Agrobiotecnología (CSIC/UPNA/Gobierno de Navarra), Iruñako etorbidea 123, Mutiloabeti, Nafarroa, 31192, Spain.
Jan F HumplíkDepartment of Chemical Biology and Genetics, Centre of the Region Haná for Biotechnological and Agricultural Research, Faculty of Science, Palacký University, Olomouc, CZ-78371, Czech Republic.
Ondřej NovákLaboratory of Growth Regulators, Centre of the Region Haná for Biotechnological and Agricultural Research, Faculty of Science, Palacký University and Institute of Experimental Botany ASCR, Olomouc, CZ-78371, Czech Republic.
Lukáš SpíchalPlant Biology and Ecology Department, Science and Technology Faculty, University of the Basque Country, Barrio Sarriena, 48940 Leioa, Spain.
Karel DoležalPlant Biology and Ecology Department, Science and Technology Faculty, University of the Basque Country, Barrio Sarriena, 48940 Leioa, Spain.
Javier Pozueta-RomeroInstituto de Agrobiotecnología (CSIC/UPNA/Gobierno de Navarra), Iruñako etorbidea 123, Mutiloabeti, Nafarroa, 31192, Spain.
Agrobiotechnology Institute · ESGobierno de Navarra · ESUniversity of the Basque Country · ESPalacký University Olomouc · CZCzech Academy of Sciences, Institute of Experimental Botany · CZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Phosphoglucose isomerase (PGI) catalyzes the reversible isomerization of glucose-6-phosphate and fructose-6-phosphate. It is involved in glycolysis and in the regeneration of glucose-6-P molecules in the oxidative pentose phosphate pathway (OPPP). In chloroplasts of illuminated mesophyll cells PGI also connects the Calvin-Benson cycle with the starch biosynthetic pathway. In this work we isolated pgi1-3, a mutant totally lacking pPGI activity as a consequence of aberrant intron splicing of the pPGI encoding gene, PGI1. Starch content in pgi1-3 source leaves was ca. 10-15% of that of wild type (WT) leaves, which was similar to that of leaves of pgi1-2, a T-DNA insertion pPGI null mutant. Starch deficiency of pgi1 leaves could be reverted by the introduction of a sex1 null mutation impeding β-amylolytic starch breakdown. Although previous studies showed that starch granules of pgi1-2 leaves are restricted to both bundle sheath cells adjacent to the mesophyll and stomata guard cells, microscopy analyses carried out in this work revealed the presence of starch granules in the chloroplasts of pgi1-2 and pgi1-3 mesophyll cells. RT-PCR analyses showed high expression levels of plastidic and extra-plastidic β-amylase encoding genes in pgi1 leaves, which was accompanied by increased β-amylase activity. Both pgi1-2 and pgi1-3 mutants displayed slow growth and reduced photosynthetic capacity phenotypes even under continuous light conditions. Metabolic analyses revealed that the adenylate energy charge and the NAD(P)H/NAD(P) ratios in pgi1 leaves were lower than those of WT leaves. These analyses also revealed that the content of plastidic 2-C-methyl-D-erythritol 4-phosphate (MEP)-pathway derived cytokinins (CKs) in pgi1 leaves were exceedingly lower than in WT leaves. Noteworthy, exogenous application of CKs largely reverted the low starch content phenotype of pgi1 leaves. The overall data show that pPGI is an important determinant of photosynthesis, energy status, growth and starch accumulation in mesophyll cells likely as a consequence of its involvement in the production of OPPP/glycolysis intermediates necessary for the synthesis of plastidic MEP-pathway derived hormones such as CKs.

Indexed as

PhotosynthesisAllelesArabidopsisArabidopsis ProteinsCytokininsErythritolGenetic LociGlucose-6-Phosphate IsomeraseMesophyll CellsMetabolic Networks and PathwaysMutationPhenotypePlant LeavesStarchSugar Phosphates2-C-methylerythritol 4-phosphateArabidopsis ProteinsCytokininsErythritolGlucose-6-Phosphate IsomeraseStarchSugar Phosphates

Identifiers

PMID25811607
PMCPMC4374969
OpenAlexW2083910372

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.