Evidence map›Paper›PMID 25810140›Full record

ArticleFish physiology and biochemistry2015

Proteomic profiling of white muscle from freshwater catfish Rita rita.

Bimal Prasanna Mohanty, Tandrima Mitra, Sudeshna Banerjee, Soma Bhattacharjee, Arabinda Mahanty, Satabdi Ganguly, Gopal Krishna Purohit, Dhanasekar Karunakaran, Sasmita Mohanty

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Article in Fish physiology and biochemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Bimal Prasanna MohantyProteomics Unit, Biochemistry Laboratory, Fishery Resource and Environmental Management Division, ICAR-Central Inland Fisheries Research Institute, Barrackpore, Kolkata, 700 120, India, bimalmohanty12@rediffmail.com.
Tandrima Mitra
Sudeshna Banerjee
Soma Bhattacharjee
Arabinda Mahanty
Satabdi Ganguly
Gopal Krishna Purohit
Dhanasekar Karunakaran
Sasmita Mohanty
Central Inland Fisheries Research Institute · INKIIT University · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Muscle tissues contribute 34-48 % of the total body mass in fish. Proteomic analysis enables better understanding of the skeletal muscle physiology and metabolism. A proteome map reflects the general fingerprinting of the fish species and has the potential to identify novel proteins which could serve as biomarkers for many aspects of aquaculture including fish physiology and growth, flesh quality, food safety and aquatic environmental monitoring. The freshwater catfish Rita rita of the family Bagridae inhabiting the tropical rivers and estuaries is an important food fish with high nutritive value and is also considered a species of choice in riverine pollution monitoring. Omics information that could enhance utility of this species in molecular research is meager. Therefore, in the present study, proteomic analysis of Rita rita muscle has been carried out and functional genomics data have been generated. A reference muscle proteome has been developed, and 23 protein spots, representing 18 proteins, have been identified by MALDI-TOF/TOF-MS and LC-MS/MS. Besides, transcript information on a battery of heat shock proteins (Hsps) has been generated. The functional genomics information generated could act as the baseline data for further molecular research on this species.

Indexed as

PhylogenyAnimalsBase SequenceCatfishesChromatography, LiquidCluster AnalysisDNA, ComplementaryElectrophoresis, Polyacrylamide GelIndiaMolecular Sequence DataMuscle Fibers, Fast-TwitchProteomeProteomicsReverse Transcriptase Polymerase Chain ReactionSequence Analysis, DNASequence HomologyDNA, ComplementaryProteome

Identifiers

PMID25810140
OpenAlexW2063707536

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.