Evidence map›Paper›PMID 25809283›Full record

ArticleElectrophoresis2015

Comparative glycoprofiling of HIV gp120 immunogens by capillary electrophoresis and MALDI mass spectrometry.

Miklós Guttman, Csaba Váradi, Kelly K Lee, András Guttman

Abstract readAddressComparative Study
In one paragraph

Article in Electrophoresis, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Review
  2. Article
  3. State-of-the-Art Glycomics Technologies in Glycobiotechnology.Advances in biochemical engineering/biotechnology · 2021
    Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Miklós GuttmanDepartment of Medicinal Chemistry, University of Washington, Seattle, WA, USA.
Csaba VáradiHorváth Csaba Laboratory of Bioseparation Sciences, University of Debrecen, Debrecen, Hungary.
Kelly K LeeDepartment of Medicinal Chemistry, University of Washington, Seattle, WA, USA.
András GuttmanHorváth Csaba Laboratory of Bioseparation Sciences, University of Debrecen, Debrecen, Hungary.

Funding

Waters ACQUITY UPLC M-Class with NanoLockSpray ionization sourceR01GM099989 · NIGMS · UNIVERSITY OF WASHINGTON · PI LEE, KELLY KEISEN · 2012 to 2020
$3.5M
Influenza Hemagglutinin: Structure, Dynamics, and Cooperativity During FusionR00GM080352 · NIGMS · UNIVERSITY OF WASHINGTON · PI LEE, KELLY KEISEN · 2009 to 2011
$740k
Investigating the Architecture of HIV Envelope GlycoproteinF32GM097805 · NIGMS · UNIVERSITY OF WASHINGTON · PI GUTTMAN, MIKLOS · 2012 to 2013
$101k
NIGMS NIH HHS F32 GM097805NIGMS NIH HHS F32-GM097805NIGMS NIH HHS R00 GM080352NIGMS NIH HHS R00-GM080352NIGMS NIH HHS R01 GM099989NIGMS NIH HHS R01-GM099989
6 · The paper itself

Abstract

The human immunodeficiency virus (HIV) envelope glycoprotein (Env) is the primary antigenic feature on the surface of the virus and is of key importance in HIV vaccinology. Vaccine trials with the gp120 subunit of Env are ongoing, with the recent RV144 trial showing moderate efficacy. gp120 is densely covered with N-linked glycans that are thought to help evade the host's humoral immune response. To assess how the global glycosylation patterns vary between gp120 constructs, the glycan profiles of several gp120s were examined by CE with LIF detection and MALDI-MS. The glycosylation profiles were found to be similar for chronic versus transmitter/founder isolates and only varied moderately between gp120s from different clades. This study revealed that the addition of specific tags, such as the herpes simplex virus glycoprotein D tag used in the RV144 trial, had significant effects on the overall glycosylation patterns. Such effects are likely to influence the immunogenicity of various Env immunogens and should be considered for future vaccine strategies, emphasizing the importance of the glycosylation analysis approach described in this paper.

Indexed as

CarbohydratesElectrophoresis, CapillaryGlycosylationHIV Envelope Protein gp120Spectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationVaccines, SyntheticCarbohydratesHIV Envelope Protein gp120Vaccines, SyntheticCE-LIFEnvgD tagGlycosylationHIV

Identifiers

PMID25809283
PMCPMC4544863

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.