Evidence map›Paper›PMID 25809251›Full record

ArticleBiophysical journal2015

Spectral snapshots of bacterial cell-wall composition and the influence of antibiotics by whole-cell NMR.

Rie Nygaard, Joseph A H Romaniuk, David M Rice, Lynette Cegelski

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 46 citations in OpenAlex.

  1. Article
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  6. Solid-state NMR molecular snapshots ofProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  7. Review
  8. Antimicrobial Peptide Mechanisms Studied by Whole-Cell Deuterium NMR.International journal of molecular sciences · 2022
    Review
  9. Review
  10. Review
  11. Article
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  18. Article
  19. Bacterial cell wall composition and the influence of antibiotics by cell-wall and whole-cell NMR.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2015
    Review
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Rie NygaardDepartment of Chemistry, Stanford University, Stanford, California.
Joseph A H RomaniukDepartment of Chemistry, Stanford University, Stanford, California.
David M RiceDepartment of Chemistry, Stanford University, Stanford, California.
Lynette CegelskiDepartment of Chemistry, Stanford University, Stanford, California. Electronic address: cegelski@stanford.edu.
Stanford University · USStanford Medicine · US

Funding

Structure, Function, and Disruption of Microbial Amyloid Assembly and Biofilm ForDP2OD007488 · OD · STANFORD UNIVERSITY · PI CEGELSKI, LYNETTE S · 2010 to 2010
$2.4M
NIH HHS DP2 OD007488NIH HHS DP2OD007488
6 · The paper itself

Abstract

Gram-positive bacteria surround themselves with a thick cell wall that is essential to cell survival and is a major target of antibiotics. Quantifying alterations in cell-wall composition are crucial to evaluating drug modes of action, particularly important for human pathogens that are now resistant to multiple antibiotics such as Staphylococcus aureus. Macromolecular and whole-cell NMR spectroscopy allowed us to observe the full panel of carbon and nitrogen pools in S. aureus cell walls and intact whole cells. We discovered that one-dimensional (13)C and (15)N NMR spectra, together with spectroscopic selections based on dipolar couplings as well as two-dimensional spin-diffusion measurements, revealed the dramatic compositional differences between intact cells and cell walls and allowed the identification of cell-wall signatures in whole-cell samples. Furthermore, the whole-cell NMR approach exhibited the sensitivity to detect distinct compositional changes due to treatment with the antibiotics fosfomycin (a cell-wall biosynthesis inhibitor) and chloramphenicol (a protein synthesis inhibitor). Whole cells treated with fosfomycin exhibited decreased peptidoglycan contributions while those treated with chloramphenicol contained a higher percentage of peptidoglycan as cytoplasmic protein content was reduced. Thus, general antibiotic modes of action can be identified by profiling the total carbon pools in intact whole cells.

Indexed as

Anti-Bacterial AgentsCarbonCell WallChloramphenicolFosfomycinMagnetic Resonance SpectroscopyNitrogenPeptidoglycanPolysaccharides, BacterialProtein Synthesis InhibitorsProtoplastsStaphylococcus aureusTeichoic AcidsAnti-Bacterial AgentsCarbonChloramphenicolFosfomycinNitrogenPeptidoglycanPolysaccharides, BacterialProtein Synthesis InhibitorsTeichoic Acids

Identifiers

PMID25809251
PMCPMC4375516
OpenAlexW2084261305

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.