Evidence map›Paper›PMID 25808491›Full record

ArticleMolecular biology of the cell2015

Integrin α3β1 regulates kidney collecting duct development via TRAF6-dependent K63-linked polyubiquitination of Akt.

Eugenia M Yazlovitskaya, Hui-Yuan Tseng, Olga Viquez, Tianxiang Tu, Glenda Mernaugh, Karen K McKee, Karen Riggins, Vito Quaranta, Amrita Pathak, Bruce D Carter and 5 more

Abstract read
In one paragraph

Article in Molecular biology of the cell, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Integrins in the kidney - beyond the matrix.Nature reviews. Nephrology · 2025
    Review
  3. Review
  4. Integrin α3 promotes TScience immunology · 2023
    Article
  5. Article
  6. Organ defects of the Usp7Biomedical journal · 2023
    Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Chapter 22: Structural and signaling functions of integrins.Biochimica et biophysica acta. Biomembranes · 2020
    Review
  12. The laminin binding α3 and α6 integrins cooperate to promote epithelial cell adhesion and growth.Matrix biology : journal of the International Society for Matrix Biology · 2019
    Article
  13. Article
  14. Autophagy and Ubiquitination inFrontiers in cellular and infection microbiology · 2018
    Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Integrin alpha6 maintains the structural integrity of the kidney collecting system.Matrix biology : journal of the International Society for Matrix Biology · 2017
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 3 countries.

Eugenia M YazlovitskayaDivision of Nephrology and Hypertension, Department of Medicine, Vanderbilt University School of Medicine, Nashville, TN 37232.
Hui-Yuan TsengDepartment of Molecular Medicine, Max Planck Institute of Biochemistry, 82152 Martinsried, Germany.
Olga ViquezDivision of Nephrology and Hypertension, Department of Medicine, Vanderbilt University School of Medicine, Nashville, TN 37232.
Tianxiang TuDivision of Nephrology and Hypertension, Department of Medicine, Vanderbilt University School of Medicine, Nashville, TN 37232.
Glenda MernaughDivision of Nephrology and Hypertension, Department of Medicine, Vanderbilt University School of Medicine, Nashville, TN 37232.
Karen K McKeeDepartment of Pathology and Laboratory Medicine, Robert Wood Johnson Medical School, Piscataway, NJ 08854.
Karen RigginsDivision of Nephrology and Hypertension, Department of Medicine, Vanderbilt University School of Medicine, Nashville, TN 37232.
Vito QuarantaDepartment of Cancer Biology, Vanderbilt University School of Medicine, Nashville, TN 37232.
Amrita PathakDepartment of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN 37232.
Bruce D CarterDepartment of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN 37232.
Peter YurchencoDepartment of Pathology and Laboratory Medicine, Robert Wood Johnson Medical School, Piscataway, NJ 08854.
Arnoud SonnenbergDivision of Cell Biology, Netherlands Cancer Institute, 1066 CX Amsterdam, Netherlands.
Ralph T BöttcherDepartment of Molecular Medicine, Max Planck Institute of Biochemistry, 82152 Martinsried, Germany.
Ambra PozziDivision of Nephrology and Hypertension, Department of Medicine, Vanderbilt University School of Medicine, Nashville, TN 37232 Department of Cancer Biology, Vanderbilt University School of Medicine, Nashville, TN 37232 Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN 37232.
Roy ZentDivision of Nephrology and Hypertension, Department of Medicine, Vanderbilt University School of Medicine, Nashville, TN 37232 Department of Cancer Biology, Vanderbilt University School of Medicine, Nashville, TN 37232 Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN 37232 Veterans Affairs Hospital, Nashville, TN 37232 roy.zent@vanderbilt.edu.
Vanderbilt University · USJohnson University · USMax Planck Institute of Biochemistry · DEThe Netherlands Cancer Institute · NL

Funding

The Laminin Receptors in Kidney FibrosisR01DK069921 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI ROY ZENT · 2005 to 2026
$9.5M
BASEMENT MEMBRANE SELF-ASSEMBLY &STRUCTURER01DK036425 · NIDDK · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI YURCHENCO, PETER DANA · 1986 to 2022
$4.3M
Betal Integrin and Renal TubulogenesisR01DK075594 · NIDDK · VANDERBILT UNIVERSITY · PI ZENT, ROY · 2008 to 2015
$2.6M
The P450 Epoxygenases as Pro-Oncogenic EnzymesR01CA162433 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI POZZI, AMBRA · 2012 to 2016
$1.9M
Integrin/TGF-beta Axis in Tubulointerstitial FibrosisR01DK095761 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI POZZI, AMBRA · 2013 to 2016
$1.4M
Structure Function Analysis of Integrins alpha1beta1 and alpha2beta2R01DK083187 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI SANDERS, CHARLES R, ZENT, ROY · 2010 to 2013
$1.3M
Inhibition of proliferation by LamininR21CA178589 · NCI · VANDERBILT UNIVERSITY · PI QUARANTA, VITO · 2014 to 2015
$375k
The ILK/PINCH/Parvin complex in renal tubulogenesisI01BX002196 · VA · VETERANS HEALTH ADMINISTRATION · PI ZENT, ROY · 2013 to 2025
–
Role of Collagen Binding Receptors in GlomerulosclerosisI01BX002025 · VA · VETERANS HEALTH ADMINISTRATION · PI AMBRA POZZI · 2013 to 2026
–
BLRD VA I01 BX002025BLRD VA I01 BX002196NCI NIH HHS R01 CA162433NCI NIH HHS R01-CA162433NCI NIH HHS R21 CA178589NIDDK NIH HHS R01 DK036425NIDDK NIH HHS R01-DK066921NIDDK NIH HHS R01 DK069921NIDDK NIH HHS R01 DK075594NIDDK NIH HHS R01-DK075594NIDDK NIH HHS R01 DK083187NIDDK NIH HHS R01-DK083187NIDDK NIH HHS R01 DK095761NIDDK NIH HHS R01-DK095761NIDDK NIH HHS R01-DK36425
6 · The paper itself

Abstract

The collecting system of the kidney develops from the ureteric bud (UB), which undergoes branching morphogenesis, a process regulated by multiple factors, including integrin-extracellular matrix interactions. The laminin (LM)-binding integrin α3β1 is crucial for this developmental program; however, the LM types and LM/integrin α3β1-dependent signaling pathways are poorly defined. We show that α3 chain-containing LMs promote normal UB branching morphogenesis and that LM-332 is a better substrate than LM-511 for stimulating integrin α3β1-dependent collecting duct cell functions. We demonstrate that integrin α3β1-mediated cell adhesion to LM-332 modulates Akt activation in the developing collecting system and that Akt activation is PI3K independent but requires decreased PTEN activity and K63-linked polyubiquitination. We identified the ubiquitin-modifying enzyme TRAF6 as an interactor with the integrin β1 subunit and regulator of integrin α3β1-dependent Akt activation. Finally, we established that the developmental defects of TRAF6- and integrin α3-null mouse kidneys are similar. Thus K63-linked polyubiquitination plays a previously unrecognized role in integrin α3β1-dependent cell signaling required for UB development and may represent a novel mechanism whereby integrins regulate signaling pathways.

Indexed as

MorphogenesisAnimalsIntegrin alpha3beta1Kidney Tubules, CollectingMiceMice, KnockoutProto-Oncogene Proteins c-aktSignal TransductionTNF Receptor-Associated Factor 6UbiquitinationAkt1 protein, mouseIntegrin alpha3beta1Proto-Oncogene Proteins c-aktTNF Receptor-Associated Factor 6

Identifiers

PMID25808491
PMCPMC4436831
OpenAlexW2133736981

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.